RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CHST1O43916 411 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 IGLL1P15814 213 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 AMY2BP19961 511 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 SLC6A6P31641 620 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 PYCR1P32322 319 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 BMXP51813 675 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 SLC7A2P52569 658 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 KLF10Q13118 480 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 DGCR6Q14129 220 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 HABP2Q14520 560 aaPredicted RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 SEC23BQ15437 767 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 TAF13Q15543 124 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 MAPRE2Q15555 327 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 STUMQ69YW2 141 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 ZBTB46Q86UZ6 589 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 FAM162AQ96A26 154 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 C12orf43Q96C57 262 aaKnown RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 DUS3LQ96G46 650 aaKnown RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 OR52D1Q9H346 318 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 ELL3Q9HB65 397 aaPredicted RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 CMTM6Q9NX76 183 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 SLC25A10Q9UBX3 287 aaPredicted RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 SF3B6Q9Y3B4 125 aaKnown RBP11.95□□□□□ -0.5
PNKP-218ENST00000625299 COL7A1Q02388 2944 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 M0R1W7 72 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 EDF1O60869 148 aaKnown RBP11.94□□□□□ -0.5
PNKP-218ENST00000625299 PEX14O75381 377 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 DIRAS1O95057 198 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 CD33P20138 364 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 TGM4P49221 684 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 GSK3BP49841 420 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 LIPEQ05469 1076 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 DGUOKQ16854 277 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 DCXRQ7Z4W1 244 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 NDUFA11Q86Y39 141 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 OR4C15Q8NGM1 316 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 ATP6V1G3Q96LB4 118 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 GAFA1Q96PS6 74 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
PNKP-218ENST00000625299 WDR13Q9H1Z4 485 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 OPA3Q9H6K4 179 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 PPP1R3EQ9H7J1 279 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 CENPMQ9NSP4 180 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 HAO2Q9NYQ3 351 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
PNKP-218ENST00000625299 K7EIL1 84 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 XRCC2O43543 280 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 SPARCP09486 303 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 PSKH1P11801 424 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 OTX1P32242 354 aaPredicted RBP11.93□□□□□ -0.5
PNKP-218ENST00000625299 GNALP38405 381 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 DDOSTP39656 456 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.93□□□□□ -0.5
PNKP-218ENST00000625299 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 GFOD2Q3B7J2 385 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 PLA1AQ53H76 456 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 DEFB121Q5J5C9 76 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 SLC35F1Q5T1Q4 408 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 HCP5Q6MZN7 132 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 CRIP3Q6Q6R5 217 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 LYPD4Q6UWN0 246 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 SLC16A9Q7RTY1 509 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 ZDHHC21Q8IVQ6 265 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 FAM185AQ8N0U4 392 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 PROKR2Q8NFJ6 384 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 RCN3Q96D15 328 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 PAPOLGQ9BWT3 736 aaKnown RBP11.93□□□□□ -0.5
PNKP-218ENST00000625299 ZNF702PQ9H963 129 aa11.93□□□□□ -0.5
PNKP-218ENST00000625299 A0A1W2PRX2 142 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 ARPC3O15145 178 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 TIPRLO75663 272 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 ANXA2P07355 339 aaKnown RBP11.92□□□□□ -0.5
PNKP-218ENST00000625299 NCK1P16333 377 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 GABRA2P47869 451 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 FAM3AP98173 230 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 ARSJQ5FYB0 599 aaPredicted RBP11.92□□□□□ -0.5
PNKP-218ENST00000625299 ATPAF1Q5TC12 328 aaPredicted RBP11.92□□□□□ -0.5
PNKP-218ENST00000625299 CCBE1Q6UXH8 406 aaPredicted RBP11.92□□□□□ -0.5
PNKP-218ENST00000625299 ZNF788Q6ZQV5 615 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 DTX3Q8N9I9 347 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 OR51L1Q8NGJ5 315 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 MED30Q96HR3 178 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 REEP6Q96HR9 211 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 AJUBAQ96IF1 538 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 RAB3IPQ96QF0 476 aaPredicted RBP11.92□□□□□ -0.5
PNKP-218ENST00000625299 KCNJ15Q99712 375 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 SERTAD4Q9NUC0 356 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 NDUFAF4Q9P032 175 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 DNAH9Q9NYC9 4486 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
PNKP-218ENST00000625299 ADARB2-AS1A8MUL3 147 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 AKR7A2O43488 359 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 RHCEP18577 417 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 CX3CR1P49238 355 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms