RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
CBWD3-217ENST00000621474 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
CBWD3-217ENST00000621474 FGF23Q9GZV9 251 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-217ENST00000621474 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
CBWD3-217ENST00000621474 RAB26Q9ULW5 256 aa12.1□□□□□ -0.47
CBWD3-217ENST00000621474 V9GYS6 101 aa12.1□□□□□ -0.47
CBWD3-217ENST00000621474 GMDSO60547 372 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 DHRS3O75911 302 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 TACSTD2P09758 323 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 CD200P41217 278 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 GATA4P43694 442 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 WDR86Q86TI4 376 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 EGFL6Q8IUX8 553 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 RDH10Q8IZV5 341 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 CSNK2A3Q8NEV1 391 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 OR14K1Q8NGZ2 314 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 TMEM80Q96HE8 168 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 PIMREGQ9BSJ6 248 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 EGLN1Q9GZT9 426 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 SLC22A4Q9H015 551 aa12.09□□□□□ -0.47
CBWD3-217ENST00000621474 IRGMA1A4Y4 181 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 EFCAB10A6NFE3 127 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 LALBAP00709 142 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CST4P01036 141 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CD99P14209 185 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 SLC25A16P16260 332 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 TNFRSF1AP19438 455 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 TNFSF4P23510 183 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 PMELP40967 661 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 GTF2A1P52655 376 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-217ENST00000621474 OR8G1Q15617 311 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 MPPED2Q15777 294 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 COMMD2Q86X83 199 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CELF2-AS1Q8N7Q2 184 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF420Q8TAQ5 688 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CCL17Q92583 94 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 C18orf12Q96KH6 178 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CNBD2Q96M20 576 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 PAPOLGQ9BWT3 736 aaKnown RBP12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-217ENST00000621474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.48
CBWD3-217ENST00000621474 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 OR4C45A6NMZ5 311 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 ANKRD30BLA7E2S9 258 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 H3BSH0 61 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 WNT9BO14905 357 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 LMX1BO60663 402 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 HTR1AP08908 422 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 FAHP16930 419 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 MAP2K3P46734 347 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 CCR9P51686 369 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM33P57088 247 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 SLC35A2P78381 396 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 PRAMEF6Q5VXH4 476 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF540Q8NDQ6 660 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 SEMA6DQ8NFY4 1073 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 OR10AC1Q8NH08 325 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 RPS4Y2Q8TD47 263 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 SMR3AQ99954 134 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 PPP1R3CQ9UQK1 317 aa12.08□□□□□ -0.48
CBWD3-217ENST00000621474 EXOSC1Q9Y3B2 195 aaKnown RBP12.08□□□□□ -0.48
CBWD3-217ENST00000621474 ZFHX3Q15911 3703 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 MALRD1Q5VYJ5 2156 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF816-ZNF321PA0A0X1KG74 233 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 LOC107986453A0A1B0GWG9 222 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 A6NIN4 97 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 DHRS7CA6NNS2 312 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 ISG15P05161 165 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 CDK1P06493 297 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 CCDC159P0C7I6 412 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 ATP6V1B1P15313 513 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 CRHBPP24387 322 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 SRP9P49458 86 aaKnown RBP12.07□□□□□ -0.48
CBWD3-217ENST00000621474 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-217ENST00000621474 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-217ENST00000621474 PRDX4Q13162 271 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 ALKBH1Q13686 389 aaKnown RBP12.07□□□□□ -0.48
CBWD3-217ENST00000621474 HFEQ30201 348 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM42Q69YG0 159 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 DOK3Q7L591 496 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 KLBQ86Z14 1044 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 PIGLQ9Y2B2 252 aa12.07□□□□□ -0.48
CBWD3-217ENST00000621474 SIRT4Q9Y6E7 314 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-217ENST00000621474 MTORP42345 2549 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 SMAD7O15105 426 aaKnown RBP12.06□□□□□ -0.48
CBWD3-217ENST00000621474 DENRO43583 198 aaKnown RBP12.06□□□□□ -0.48
CBWD3-217ENST00000621474 ZFPL1O95159 310 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 INHBBP09529 407 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 UBCP0CG48 685 aaKnown RBP12.06□□□□□ -0.48
CBWD3-217ENST00000621474 MYL12AP19105 171 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 THBS2P35442 1172 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 TGM4P49221 684 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 CSNK2BP67870 215 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms