RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SPEM2Q0P670 501 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 OR2A2Q6IF42 318 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 OR56B1Q8NGI3 324 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 C14orf79Q96F83 325 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 KIRREL1Q96J84 757 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 CLCC1Q96S66 551 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 EDARQ9UNE0 448 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 LHFPL6Q9Y693 200 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 HSD11B2P80365 405 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 HGFACQ04756 655 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 ARFRP1Q13795 201 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 FAM76BQ5HYJ3 339 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 ABHD12BQ7Z5M8 362 aaPredicted RBP17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 OR8B12Q8NGG6 310 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 HIST1H2BAQ96A08 127 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 C5orf34Q96MH7 638 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 DUSP15Q9H1R2 295 aaPredicted RBP17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 UCK1Q9HA47 277 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 POMT1Q9Y6A1 747 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 PIAS3Q9Y6X2 628 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 FER1L5A0AVI2 2057 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 ADAMTS9Q9P2N4 1935 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 GON4LQ3T8J9 2241 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 FIGNL2A6NMB9 653 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 CRTAPO75718 401 aaPredicted RBP17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 CST4P01036 141 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 SLC2A1P11166 492 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 ZNF17P17021 662 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 LAP3P28838 519 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 DVL1P1P54792 670 aaPredicted RBP17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 COMMD2Q86X83 199 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 FOXRED2Q8IWF2 684 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 NANPQ8TBE9 248 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 ST8SIA1Q92185 356 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 ST6GALNAC5Q9BVH7 336 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 MOB1AQ9H8S9 216 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 ZNF319Q9P2F9 582 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 TIMM10BQ9Y5J6 103 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 ANKUB1A6NFN9 424 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 C5orf52A6NGY3 159 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 SFTPBP07988 381 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 OR8U9P0C7N5 309 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 OR3A2P47893 321 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 NSUN5P2Q63ZY6 315 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 Q6ZRG5 221 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 OR8U1Q8NH10 309 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 KLHDC7BQ96G42 594 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 AKR1E2Q96JD6 320 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 NUDT22Q9BRQ3 303 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 CNTNAP3Q9BZ76 1288 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 CHRNA10Q9GZZ6 450 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 GPR84Q9NQS5 396 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 EHFQ9NZC4 300 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 CYP8B1Q9UNU6 501 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 B3GALT5Q9Y2C3 310 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 MEMO1Q9Y316 297 aa17.28■□□□□ 0.36
PDLIM3-212ENST00000620787 ZNF878C9JN71 531 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 HCKP08631 526 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 SMIM6P0DI80 62 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 ADH6P28332 368 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 PTGER4P35408 488 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 DHPSP49366 369 aaPredicted RBP17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 SNU13P55769 128 aaKnown RBP17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 CSNK2A1P68400 391 aaPredicted RBP17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 AKIRIN2Q53H80 203 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 RBMS3Q6XE24 437 aaKnown RBP17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 CSNK2A3Q8NEV1 391 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 LYPD6BQ8NI32 183 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 SSC4DQ8WTU2 575 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 MAFIPQ8WZ33 124 aa17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 MRPL13Q9BYD1 178 aaKnown RBP17.27■□□□□ 0.36
PDLIM3-212ENST00000620787 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 C1orf196B1AJZ1 125 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 RPL12P30050 165 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 AKR1C3P42330 323 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 C16orf47Q6ZP98 133 aaPredicted RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 SECTM1Q8WVN6 248 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 EMG1Q92979 244 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 FAM71F1Q96KD3 344 aaPredicted RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 MTIF3Q9H2K0 278 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 SERINC1Q9NRX5 453 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 B3GAT1Q9P2W7 334 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 UBE2CO00762 179 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF44P15621 663 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 CPT2P23786 658 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 APOBEC1P41238 236 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF121P58317 390 aaPredicted RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 TAS2R46P59540 309 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 SLC16A13Q7RTY0 426 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 FAM89BQ8N5H3 189 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 MVB12AQ96EY5 273 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 URM1Q9BTM9 101 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 OR10A2Q9H208 303 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF304Q9HCX3 659 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 ZMAT5Q9UDW3 170 aaKnown RBP17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 FBXL17Q9UF56 701 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 MMP17Q9ULZ9 603 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 VDAC3Q9Y277 283 aa17.26■□□□□ 0.35
PDLIM3-212ENST00000620787 KPTNQ9Y664 436 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms