RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 UTP4Q969X6 686 aaKnown RBP14.26□□□□□ -0.13
HMGN3-203ENST00000620514 LYZL4Q96KX0 146 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 PAPOLGQ9BWT3 736 aaKnown RBP14.26□□□□□ -0.13
HMGN3-203ENST00000620514 SMURF1Q9HCE7 757 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 PAPOLBQ9NRJ5 636 aaKnown RBP14.26□□□□□ -0.13
HMGN3-203ENST00000620514 ERVK-18Q9QC07 812 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 MDFIC2A0A1B0GVS7 189 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 CCDC182A6NF36 153 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 MITFO75030 526 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-203ENST00000620514 ALOX5APP20292 161 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 CFL1P23528 166 aaKnown RBP14.25□□□□□ -0.13
HMGN3-203ENST00000620514 ACKR3P25106 362 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 BAMBIQ13145 260 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 SNAPC1Q16533 368 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 FAHD1Q6P587 224 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 OR8B12Q8NGG6 310 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 KIF17Q9P2E2 1029 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 LRP12Q9Y561 859 aa14.25□□□□□ -0.13
HMGN3-203ENST00000620514 A0A1B0GW55 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 PRR32B1ATL7 298 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 M0R129 80 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 PSMD9O00233 223 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 ENSAO43768 121 aaKnown RBP14.24□□□□□ -0.13
HMGN3-203ENST00000620514 MRPL3P09001 348 aaKnown RBP14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L2P0CJ85 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L3P0CJ86 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L4P0CJ87 422 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L5P0CJ88 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L6P0CJ89 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L7P0CJ90 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 PRTN3P24158 256 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 GNALP38405 381 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 NPY4RP50391 375 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 PSMA6P60900 246 aaKnown RBP14.24□□□□□ -0.13
HMGN3-203ENST00000620514 TEX36Q5VZQ5 186 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4L9Q6RFH8 374 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-203ENST00000620514 WDR82Q6UXN9 313 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 BRD3OSQ6XYD6 125 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 C9orf139Q6ZV77 190 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 KRT77Q7Z794 578 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 FGFRL1Q8N441 504 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 CSNK2A3Q8NEV1 391 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 OR5K1Q8NHB7 308 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 ITPKCQ96DU7 683 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 SEH1LQ96EE3 360 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 TEAD3Q99594 435 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 FGF23Q9GZV9 251 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-203ENST00000620514 RGCCQ9H4X1 137 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 RNPEPL1Q9HAU8 725 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 TRIM36Q9NQ86 728 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 DUX4Q9UBX2 424 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 LAMP5Q9UJQ1 280 aa14.24□□□□□ -0.13
HMGN3-203ENST00000620514 ZNF850A8MQ14 1090 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.23□□□□□ -0.13
HMGN3-203ENST00000620514 CDIPTO14735 213 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 NDUFA2O43678 99 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 PRKYO43930 277 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 SFTPBP07988 381 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 CFHR2P36980 270 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 PRDX4Q13162 271 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 PTGES3Q15185 160 aaKnown RBP14.23□□□□□ -0.13
HMGN3-203ENST00000620514 AWAT1Q58HT5 328 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 BCDIN3DQ7Z5W3 292 aaKnown RBP14.23□□□□□ -0.13
HMGN3-203ENST00000620514 C3orf56Q8N813 242 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 DNAJC9Q8WXX5 260 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 PCGF1Q9BSM1 259 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 TEX12Q9BXU0 123 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 TTTY10Q9BZA0 68 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 YIPF3Q9GZM5 350 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 COPS3Q9UNS2 423 aa14.23□□□□□ -0.13
HMGN3-203ENST00000620514 ZNF879B4DU55 563 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 DVL1O14640 695 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 EPHA2P29317 976 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 MTNR1AP48039 350 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 IL5RAQ01344 420 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 SLC9A3R2Q15599 337 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 ATP6AP1Q15904 470 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 CD276Q5ZPR3 534 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 GALNT4Q8N4A0 578 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 OR5P3Q8WZ94 311 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 PIGCQ92535 297 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 TAF15Q92804 592 aaKnown RBP eCLIP14.22□□□□□ -0.13
HMGN3-203ENST00000620514 RPL3LQ92901 407 aaKnown RBP14.22□□□□□ -0.13
HMGN3-203ENST00000620514 CCL13Q99616 98 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 MICU1Q9BPX6 476 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 TLNRD1Q9H1K6 362 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 MPC1Q9Y5U8 109 aa14.22□□□□□ -0.13
HMGN3-203ENST00000620514 ANXA2P2A6NMY6 339 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 TMPRSS2O15393 492 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 CST4P01036 141 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 HKR1P10072 659 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 MMP9P14780 707 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 GMFBP60983 142 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 MICBQ29980 383 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 DEFB112Q30KQ8 113 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 WDR38Q5JTN6 314 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 BTN2A1Q7KYR7 527 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 AMIGO2Q86SJ2 522 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms