RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TRIM2Q9C040 744 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 C20orf141Q9NUB4 165 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 SERGEFQ9UGK8 458 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 FOXD3Q9UJU5 478 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 ZNF443Q9Y2A4 671 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 ZNF736B4DX44 427 aaPredicted RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 TNFSF10P50591 281 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CSNK1G2P78368 415 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 OPN5Q6U736 354 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 OR2L13Q8N349 312 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 OR14L1PQ8NHC6 308 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 MFSD8Q8NHS3 518 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 SLC35A4Q96G79 324 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 LINC00615Q96LM1 132 aaPredicted RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 PCBD2Q9H0N5 130 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 ARV1Q9H2C2 271 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 DNAH14Q0VDD8 3507 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 TRBV24-1A0A075B6N3 115 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 RIIAD1A6NNX1 92 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CLEC3AO75596 197 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 SCAF4O95104 1147 aaKnown RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 CYB5AP00167 134 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 HPRT1P00492 218 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 MBPP02686 304 aaPredicted RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 LCATP04180 440 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 SEC11BP0C7V7 166 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 TDGF1P13385 188 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CHRNB4P30926 498 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 ARRB1P49407 418 aaPredicted RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 EFNB2P52799 333 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 SLC35A1P78382 337 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CRMP1Q14194 572 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 GAS6Q14393 721 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 ALG10BQ5I7T1 473 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 AMZ2Q86W34 360 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 MRPL41Q8IXM3 137 aaKnown RBP9.24□□□□□ -0.93
VPS11-207ENST00000620429 ZNF100Q8IYN0 542 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CCDC74BQ96LY2 380 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 PRSS27Q9BQR3 290 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 CAPN10Q9HC96 672 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 TMEM242Q9NWH2 141 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 GPR34Q9UPC5 381 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 SRPK3Q9UPE1 567 aa9.24□□□□□ -0.93
VPS11-207ENST00000620429 SCN3AQ9NY46 2000 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 A0A1W2PPV9 198 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 A8MVM7 634 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 B4DEV8 164 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 C4orf51C9J302 202 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 MASP2O00187 686 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 HSD17B6O14756 317 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 SCGNO76038 276 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 RCBTB2O95199 551 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 ZNF616Q08AN1 781 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 FAM189A2Q15884 450 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 ZNF836Q6ZNA1 936 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 KMT5CQ86Y97 462 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 LYG1Q8N1E2 194 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 GBGT1Q8N5D6 347 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 SLC16A11Q8NCK7 471 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 OR51A7Q8NH64 312 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 CXorf40AQ8TE69 158 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 TMEM239Q8WW34 195 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 KCNE4Q8WWG9 221 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 CDS1Q92903 461 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 MRGPRFQ96AM1 343 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 TVP23CQ96ET8 276 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 TP53RKQ96S44 253 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 RAB18Q9NP72 206 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 CDV3Q9UKY7 258 aaKnown RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 ICAM5Q9UMF0 924 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 TMED7Q9Y3B3 224 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 STRAPQ9Y3F4 350 aaKnown RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 WDR45Q9Y484 360 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 NUP210LQ5VU65 1888 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 TRAV27A0A087WT01 109 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 FTCDNL1E5RQL4 147 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 DOK2O60496 412 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 CDC40O60508 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS11-207ENST00000620429 CYB5R3P00387 301 aaPredicted RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 ERCC1P07992 297 aaPredicted RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 ERGP11308 486 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 HIST1H1TP22492 207 aaPredicted RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 OR10J1P30954 320 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 WASP42768 502 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 Q499Y3 187 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 LHFPL4Q7Z7J7 247 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 BHLHE23Q8NDY6 225 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 OR56B2PQ8NGI1 322 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 OR51F2Q8NH61 342 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 ACY3Q96HD9 319 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 C6orf106Q9H6K1 298 aaPredicted RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 METTL8Q9H825 291 aaKnown RBP9.23□□□□□ -0.93
VPS11-207ENST00000620429 LANCL2Q9NS86 450 aa9.23□□□□□ -0.93
VPS11-207ENST00000620429 TM7SF3Q9NS93 570 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms