RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	TGFBR3	Q03167	851 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	RIPPLY1	Q0D2K3	151 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ASAH1	Q13510	395 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SEM1	Q6ZVN7	128 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PGAP1	Q75T13	922 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	OR8S1	Q8NH09	359 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	NICN1	Q9BSH3	213 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PLSCR2	Q9NRY7	297 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	TRAV6	A0A075B6T7	132 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	GGT3P	A6NGU5	568 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	BOLA2-SMG1P6	H3BVE0	249 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SPRY1	O43609	319 aa	Predicted RBP	11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	TOX	O94900	526 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	HOXC12	P31275	282 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MNDA	P41218	407 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CCR6	P51684	374 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MTCP1	P56278	107 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	KISS1	Q15726	138 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MOB3C	Q70IA8	216 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	OR56B2P	Q8NGI1	322 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PAPOLG	Q9BWT3	736 aa	Known RBP	11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ACACB	O00763	2458 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ERCC1	P07992	297 aa	Predicted RBP	11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	VSIG8	P0DPA2	414 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CCL1	P22362	96 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PLCXD3	Q63HM9	321 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	FAM166A	Q6J272	317 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MZT2B	Q6NZ67	158 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PLET1	Q6UQ28	207 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MRPL21	Q7Z2W9	205 aa	Known RBP	11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	POFUT1	Q9H488	388 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	METTL17	Q9H7H0	456 aa	Predicted RBP	11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PROCR	Q9UNN8	238 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	RELN	P78509	3460 aa		11.5	□□□□□ -0.57
CYFIP2-222	ENST00000620254	TMEM235	A6NFC5	223 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	AHRR	A9YTQ3	701 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ORC5	O43913	435 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	TMEM225B	P0DP42	221 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	BMP5	P22003	454 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ARR3	P36575	388 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	FAM3A	P98173	230 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	RTL6	Q6ICC9	239 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CXorf67	Q86X51	503 aa	Predicted RBP	11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254		Q8NA96	180 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SLC30A7	Q8NEW0	376 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	FCAMR	Q8WWV6	532 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	DACT3	Q96B18	629 aa	Predicted RBP	11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	S100A13	Q99584	98 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ASF1B	Q9NVP2	202 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CRIM1	Q9NZV1	1036 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	RHBDD3	Q9Y3P4	386 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	UNC119	Q13432	240 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	TNK1	Q13470	666 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	GFRAL	Q6UXV0	394 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MINDY2	Q8NBR6	621 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	FAM215A	Q9Y5M1	114 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	FIGNL2	A6NMB9	653 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ZNF850	A8MQ14	1090 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254		A8MV72	311 aa	Predicted RBP	11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	IL2RA	P01589	272 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	RFPL4B	Q6ZWI9	263 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SETD6	Q8TBK2	473 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SMIM4	Q8WVI0	70 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	NANOS1	Q8WY41	292 aa	Known RBP	11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CHST5	Q9GZS9	411 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	GPR160	Q9UJ42	338 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CACNG2	Q9Y698	323 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254		V9GYS6	101 aa		11.49	□□□□□ -0.57
CYFIP2-222	ENST00000620254	THBS4	P35443	961 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MMP15	P51511	669 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SNU13	P55769	128 aa	Known RBP	11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	GK2	Q14410	553 aa	Predicted RBP	11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	NSUN5P2	Q63ZY6	315 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PNLDC1	Q8NA58	520 aa	Known RBP	11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	MRI1	Q9BV20	369 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	GLRX2	Q9NS18	164 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	GMDS	O60547	372 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	CSN2	P05814	226 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	PTBP1	P26599	531 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	7e-6	■■□□□ 11.4
CYFIP2-222	ENST00000620254	GIF	P27352	417 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ERVS71-1	P61550	626 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	C1orf100	Q5SVJ3	147 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SNRNP40	Q96DI7	357 aa	Known RBP	11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	XRCC3	O43542	346 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	NRAS	P01111	189 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	NR4A2	P43354	598 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	ID4	P47928	161 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254		Q6ZT83	130 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	HPS1	Q92902	700 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	STARD4	Q96DR4	205 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	POM121L2	Q96KW2	1035 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	SELENOI	Q9C0D9	397 aa		11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	RBFOX1	Q9NWB1	397 aa	Known RBP	11.48	□□□□□ -0.57
CYFIP2-222	ENST00000620254	NBEA	Q8NFP9	2946 aa		11.47	□□□□□ -0.57
CYFIP2-222	ENST00000620254	OR14I1	A6ND48	311 aa		11.47	□□□□□ -0.57
CYFIP2-222	ENST00000620254	TNFSF13	O75888	250 aa		11.47	□□□□□ -0.57
CYFIP2-222	ENST00000620254	WNT5A	P41221	380 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms