RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 TTLL10Q6ZVT0 673 aa11.54□□□□□ -0.56
SKP2-209ENST00000620197 COX15Q7KZN9 410 aa11.54□□□□□ -0.56
SKP2-209ENST00000620197 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
SKP2-209ENST00000620197 MRPL38Q96DV4 380 aaKnown RBP11.54□□□□□ -0.56
SKP2-209ENST00000620197 TM2D1Q9BX74 207 aa11.54□□□□□ -0.56
SKP2-209ENST00000620197 CACFD1Q9UGQ2 172 aa11.54□□□□□ -0.56
SKP2-209ENST00000620197 B3GALT5Q9Y2C3 310 aa11.54□□□□□ -0.56
SKP2-209ENST00000620197 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 NPIPA5E9PKD4 350 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 E9PLN8 166 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 RRP8O43159 456 aaKnown RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 PMELP40967 661 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 PTGDSP41222 190 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 AIMP2Q13155 320 aaKnown RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 AVPI1Q5T686 147 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 GLIPR1L1Q6UWM5 242 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 D2HGDHQ8N465 521 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 OR8B12Q8NGG6 310 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 KCNG3Q8TAE7 436 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 RAB3CQ96E17 227 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 TGIF2Q9GZN2 237 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 SERINC1Q9NRX5 453 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 NPIPA1Q9UND3 350 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 MRPS28Q9Y2Q9 187 aaKnown RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 STARD10Q9Y365 291 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 C5orf51A6NDU8 294 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 PRF1P14222 555 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 ZNF708P17019 499 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 CHST4Q8NCG5 386 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 POC1BQ8TC44 478 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 TMEM234Q8WY98 164 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 KLHDC7BQ96G42 594 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 MTIF3Q9H2K0 278 aaKnown RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 DHCR7Q9UBM7 475 aaKnown RBP11.53□□□□□ -0.56
SKP2-209ENST00000620197 PCDHGA1Q9Y5H4 931 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 F5P12259 2224 aa11.53□□□□□ -0.56
SKP2-209ENST00000620197 NUDT14O95848 222 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 GLAP06280 429 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 PTGFRP43088 359 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 NPY4RP50391 375 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 POU3F1Q03052 451 aaPredicted RBP11.52□□□□□ -0.56
SKP2-209ENST00000620197 RAB32Q13637 225 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 ZFP82Q8N141 532 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 CD207Q9UJ71 328 aa11.52□□□□□ -0.56
SKP2-209ENST00000620197 C13orf42A0A1B0GVH6 325 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 ZNF878C9JN71 531 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 FBXO24O75426 580 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 RNF4P78317 190 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 PDZK1IP1Q13113 114 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 SLC29A4Q7RTT9 530 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 DTX1Q86Y01 620 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 OR14K1Q8NGZ2 314 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 ARHGAP5-AS1Q96IT6 56 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 SLC22A11Q9NSA0 550 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 AMDHD2Q9Y303 409 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 FAM96BQ9Y3D0 163 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 TRIOO75962 3097 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 ZNF705EA8MWA4 302 aaPredicted RBP11.52□□□□□ -0.57
SKP2-209ENST00000620197 TRAF3IP2O43734 574 aaPredicted RBP11.52□□□□□ -0.57
SKP2-209ENST00000620197 IFNA6P05013 189 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 KIAA0100Q14667 2235 aaKnown RBP11.52□□□□□ -0.57
SKP2-209ENST00000620197 NOXO1Q8NFA2 376 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 PRR13Q9NZ81 148 aa11.52□□□□□ -0.57
SKP2-209ENST00000620197 ASCC3Q8N3C0 2202 aaKnown RBP11.51□□□□□ -0.57
SKP2-209ENST00000620197 IGLV3-12A0A075B6K2 115 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 A0A1W2PP11 408 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 DKK1O94907 266 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 SFTA3P0C7M3 94 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 NSDHLQ15738 373 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 LINC00469Q8N7U9 141 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 ZNF248Q8NDW4 579 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 OR56B1Q8NGI3 324 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 LYZL4Q96KX0 146 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 SEBOXQ9HB31 216 aaPredicted RBP11.51□□□□□ -0.57
SKP2-209ENST00000620197 SOHLH2Q9NX45 425 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 LOC102725191A0A1B0GVB3 256 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 C5orf52A6NGY3 159 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 UBE2CO00762 179 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 PTGER4P35408 488 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 ZNF133P52736 654 aaPredicted RBP11.51□□□□□ -0.57
SKP2-209ENST00000620197 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
SKP2-209ENST00000620197 C17orf67Q0P5P2 114 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 FOXF1Q12946 379 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 LANCL3Q6ZV70 420 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 GKN2Q86XP6 184 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.51□□□□□ -0.57
SKP2-209ENST00000620197 C15orf54Q8N8G6 183 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 DDIT4LQ96D03 193 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 SHDQ96IW2 340 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 COPS7AQ9UBW8 275 aa11.51□□□□□ -0.57
SKP2-209ENST00000620197 CYP8B1Q9UNU6 501 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms