RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 FAM71E1Q6IPT2 247 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 CMTM8Q8IZV2 173 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 STRADBQ9C0K7 418 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 INTS1Q8N201 2190 aaKnown RBP13.67□□□□□ -0.22
COL5A1-208ENST00000618395 A0A1B0GTW7 788 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 LEFTY1O75610 366 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 CCR2P41597 374 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 EGR3Q06889 387 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 NKAIN2Q5VXU1 208 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MRPL37Q9BZE1 423 aaKnown RBP13.67□□□□□ -0.22
COL5A1-208ENST00000618395 PCNX2A6NKB5 2137 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 HS3ST1O14792 307 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 RNF224P0DH78 156 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 FZD2Q14332 565 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MAVSQ7Z434 540 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 SHDQ96IW2 340 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 SMDT1Q9H4I9 107 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
COL5A1-208ENST00000618395 HSPB2A8KAH6 182 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 CD14P08571 375 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 HSPB2Q16082 182 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 WDFY2Q96P53 400 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 DOK1Q99704 481 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ANAPC13Q9BS18 74 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 OR51B4Q9Y5P0 310 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 BLACEA4D250 179 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 FAM72CH0Y354 149 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 DOK2O60496 412 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 PTP4A3O75365 173 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 FAM72AQ5TYM5 149 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 FAM72DQ6L9T8 149 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 FAM72BQ86X60 149 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 NEIL1Q96FI4 390 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ZFYVE21Q9BQ24 234 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 TBX21Q9UL17 535 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 A0A1W2PRU2 124 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ZAR1LA6NP61 321 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 C17orf105B2RV13 164 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 TRMT12Q53H54 448 aaKnown RBP13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ARRDC1Q8N5I2 433 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 SCAMP4Q969E2 229 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 XRN1Q8IZH2 1706 aaKnown RBP13.66□□□□□ -0.22
COL5A1-208ENST00000618395 DNLZQ5SXM8 178 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 MUC20Q8N307 709 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ECM29Q5VYK3 1845 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 TMX2-CTNND1H3BSU7 103 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM183AQ8IXX5 376 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 KREMEN2Q8NCW0 462 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 SLCO4A1Q96BD0 722 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 HSF4Q9ULV5 492 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 H3BQ15 152 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 CYC1P08574 325 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 LGALSLQ3ZCW2 172 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ACSM6Q6P461 480 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
COL5A1-208ENST00000618395 ZNF430Q9H8G1 570 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-208ENST00000618395 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 CITED2Q99967 270 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 SLC2A4RGQ9NR83 387 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 CBLCQ9ULV8 474 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 SLC5A10A0PJK1 596 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 LSM11P83369 360 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 ADIPOQQ15848 244 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 PABPC1L2AQ5JQF8 200 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 D2HGDHQ8N465 521 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 H7C1C5 153 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 AVPR2P30518 371 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 PNLIPRP3Q17RR3 467 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 MYOZ3Q8TDC0 251 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM255BQ8WV15 326 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 ADOQ96SZ5 270 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 UTP23Q9BRU9 249 aaKnown RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 KCNK7Q9Y2U2 307 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 GPANK1O95872 356 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 SOD3P08294 240 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 INHBBP09529 407 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 SRP14P37108 136 aaKnown RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 HIST1H1EP10412 219 aaKnown RBP13.65□□□□□ -0.22
COL5A1-208ENST00000618395 RING1Q06587 406 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 NOGQ13253 232 aa13.65□□□□□ -0.22
COL5A1-208ENST00000618395 MEGF6O75095 1541 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 EFSO43281 561 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 MBPP02686 304 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-208ENST00000618395 PNLIPRP2P54317 469 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 DERL1Q9BUN8 251 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 C11orf68Q9H3H3 251 aaKnown RBP13.64□□□□□ -0.23
COL5A1-208ENST00000618395 FCMRO60667 390 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 ARHGEF39Q8N4T4 335 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 VAX2Q9UIW0 290 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 NDUFB7P17568 137 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 GDF7Q7Z4P5 450 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 RNF175Q8N4F7 328 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 LEFTY2O00292 366 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms