RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF780AO75290 641 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GLSO94925 669 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SLC25A1P53007 311 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZXDAP98168 799 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 KISS1Q15726 138 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PLPPR5Q32ZL2 321 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HAGHLQ6PII5 290 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 C15orf40Q8WUR7 153 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZCCHC4Q9H5U6 513 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MRPS18AQ9NVS2 196 aaKnown RBP13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PTTG3PQ9NZH4 202 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR4E1P0C645 316 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF806P0C7X5 589 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GLRA1P23415 457 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 LINC00299Q6ZSB3 139 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR2M3Q8NG83 312 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NXF2Q9GZY0 626 aaKnown RBP13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 A0A1B0GW55 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 C5orf63A6NC05 138 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GJE1A6NN92 205 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NKX2-8O15522 239 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 XRCC3O43542 346 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SSX5O60225 188 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MT-CO3P00414 261 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4L2P0CJ85 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4L3P0CJ86 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4L4P0CJ87 422 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4L5P0CJ88 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4L6P0CJ89 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4L7P0CJ90 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CD96P40200 585 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GPM6AP51674 278 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RPS11P62280 158 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SULF2Q8IWU5 870 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR11H4Q8NGC9 324 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 STK35Q8TDR2 534 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TRIB1Q96RU8 372 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ADAM19Q9H013 955 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HAO2Q9NYQ3 351 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DUX4Q9UBX2 424 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TMEM221A6NGB7 291 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EFNA2O43921 213 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 C1QBP02746 253 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EXOSC2Q13868 293 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CLINT1Q14677 625 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SEMA6DQ8NFY4 1073 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR9K2Q8NGE7 335 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 KCNG3Q8TAE7 436 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FOXB1Q99853 325 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MAGT1Q9H0U3 335 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FOXJ2Q9P0K8 574 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 APLNRP35414 380 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 WDSUB1Q8N9V3 476 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
TNFRSF11A-206ENST00000617039 H3BP45 60 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 M0R296 226 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TTRP02766 147 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ICAM2P13598 275 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 IFITM2Q01629 132 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ECH1Q13011 328 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR2T2Q6IF00 324 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF2Q9BSG1 426 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CDH20Q9HBT6 801 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF175Q9Y473 711 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 LPLP06858 475 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CD46P15529 392 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DCAF12L2Q5VW00 463 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR10R2Q8NGX6 335 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 APH1AQ96BI3 265 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TMEM9BQ9NQ34 198 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF275Q9NSD4 429 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DOCK11Q5JSL3 2073 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SERPINF1P36955 418 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RAB1AP62820 205 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TAGLNQ01995 201 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 IL11RAQ14626 422 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CD200R1LQ6Q8B3 271 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HSD17B11Q8NBQ5 300 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RNF150Q9ULK6 438 aa13.09□□□□□ -0.31
TNFRSF11A-206ENST00000617039 IL10RAQ13651 578 aa13.08□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CCDC28AQ8IWP9 274 aa13.08□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR2AK2Q8NG84 335 aa13.08□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ANGPTL6Q8NI99 470 aa13.08□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GUCD1Q96NT3 240 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms