RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 PDCD10Q9BUL8 212 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 PURGQ9UJV8 347 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 DNAJC13O75165 2243 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 SIX6O95475 246 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 ISG15P05161 165 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 POU3F2P20265 443 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 GUCA1AP43080 201 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 DCAF10Q5QP82 559 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF627Q7L945 461 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 DEFB124Q8NES8 71 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 SLC25A28Q96A46 364 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 ULBP2Q9BZM5 246 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 RIMS4Q9H426 269 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 PARD6AQ9NPB6 346 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 LOC100289279A0A1B0GTE1 492 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 LOC102725191A0A1B0GVB3 256 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 NEURL1O76050 574 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 CLINT1Q14677 625 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 TMEM123Q8N131 208 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 FAM46BQ96A09 425 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 GPR84Q9NQS5 396 aa13.71□□□□□ -0.21
SEMA3B-212ENST00000616701 FAM186AA6NE01 2351 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 SPAARA0A1B0GVQ0 90 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 M0R233 179 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 PATE4P0C8F1 98 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 SMIM6P0DI80 62 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 SLC6A9P48067 706 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 PSMA6P60900 246 aaKnown RBP13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 FOXO1Q12778 655 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 OVCH2Q7RTZ1 564 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 ALKBH3Q96Q83 286 aaPredicted RBP13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 OR10A4Q9H209 315 aa13.71□□□□□ -0.22
SEMA3B-212ENST00000616701 KIAA1549Q9HCM3 1950 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 A0A1B0GTI1 187 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 A0A1B0GVI7 797 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 GGT3PA6NGU5 568 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 DHHO43323 396 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 XRCC3O43542 346 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 IGHV3-9P01782 118 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 DBHP09172 617 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 PVALBP20472 110 aaPredicted RBP13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 MSR1P21757 451 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 RAC3P60763 192 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 ANKRD16Q6P6B7 361 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 THRSPQ92748 146 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 TMEM54Q969K7 222 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 MRI1Q9BV20 369 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 GJE1A6NN92 205 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 CNR1P21554 472 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 ENDOGQ14249 297 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 OR1C1Q15619 314 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 HACD4Q5VWC8 232 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 HAGHLQ6PII5 290 aaPredicted RBP13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 SUMF1Q8NBK3 374 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 ABHD3Q8WU67 409 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 GPR87Q9BY21 358 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 CNTD2Q9H8S5 307 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 NDRG3Q9UGV2 375 aa13.7□□□□□ -0.22
SEMA3B-212ENST00000616701 ZFHX4Q86UP3 3567 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 VAMP5O95183 116 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 ALDOBP05062 364 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 TMEM11P17152 192 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 CXCL3P19876 107 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 FSTP19883 344 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 GNG10P50151 68 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 PRSS12P56730 875 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 MOGAT2Q3SYC2 334 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 FAM76BQ5HYJ3 339 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 OR8S1Q8NH09 359 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 DVL3Q92997 716 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 UTP23Q9BRU9 249 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 GPR160Q9UJ42 338 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 NUBP2Q9Y5Y2 271 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 PRRC2CQ9Y520 2896 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 C21orf140B9A014 251 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 ACOT7O00154 380 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 TGM6O95932 706 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 H2AFB2P0C5Z0 115 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 STOMP27105 288 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 PTGFRP43088 359 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 SPCS3P61009 180 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 SRSF6Q13247 344 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 COTL1Q14019 142 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 PCGF3Q3KNV8 242 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 ALKAL2Q6UX46 152 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 DTX1Q86Y01 620 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 CBLN2Q8IUK8 224 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 ACBD4Q8NC06 268 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 OR2M7Q8NG81 312 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 OR2V1Q8NHB1 315 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 DTD1Q8TEA8 209 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 NABP1Q96AH0 204 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 NKX6-2Q9C056 277 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 NELFAQ9H3P2 528 aa13.69□□□□□ -0.22
SEMA3B-212ENST00000616701 FLVCR1Q9Y5Y0 555 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms