RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 RAB33BQ9H082 229 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 PLEKHJ1Q9NW61 149 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 PCDHGA1Q9Y5H4 931 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 TMEM225BP0DP42 221 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 ZBTB25P24278 435 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 CEBPEQ15744 281 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 ACTBL2Q562R1 376 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 AWAT1Q58HT5 328 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 FHL5Q5TD97 284 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 FAM57BQ71RH2 274 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 MR1Q95460 341 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 LUZP4Q9P127 313 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 PIEZO2Q9H5I5 2752 aa12.8□□□□□ -0.36
EPHB4-210ENST00000616502 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 TMEM127O75204 238 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CT45A8P0DMV1 189 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CT45A9P0DMV2 189 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CSRP2Q16527 193 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 PRTGQ2VWP7 1150 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 SP6Q3SY56 376 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CT45A2Q5DJT8 189 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 C1orf140Q5VVS0 124 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 ZSCAN4Q8NAM6 433 aaPredicted RBP12.79□□□□□ -0.36
EPHB4-210ENST00000616502 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 TMEM184BQ9Y519 407 aaPredicted RBP12.79□□□□□ -0.36
EPHB4-210ENST00000616502 FLVCR1Q9Y5Y0 555 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 R4GMQ9 66 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 FREM2Q5SZK8 3169 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CD1AP06126 327 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CLEC18BQ6UXF7 455 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CPEB2Q7Z5Q1 589 aaKnown RBP12.79□□□□□ -0.36
EPHB4-210ENST00000616502 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 WBP1Q96G27 269 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 PLXNB3Q9ULL4 1909 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 ACAA1P09110 424 aaPredicted RBP12.79□□□□□ -0.36
EPHB4-210ENST00000616502 CD27P26842 260 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 VAMP2P63027 116 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 ZNF141Q15928 474 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 PHLDA2Q53GA4 152 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 EMC4Q5J8M3 183 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 PIGQQ9BRB3 760 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 SLC17A5Q9NRA2 495 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 ALKBH4Q9NXW9 302 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 KCNK7Q9Y2U2 307 aa12.79□□□□□ -0.36
EPHB4-210ENST00000616502 COL4A3Q01955 1670 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 C7orf77A4D0Y5 90 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 EFSO43281 561 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 SLC6A8P48029 635 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 BIDP55957 195 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 ATG4DQ86TL0 474 aaPredicted RBP12.78□□□□□ -0.36
EPHB4-210ENST00000616502 ZDHHC22Q8N966 263 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 C2orf50Q96LR7 162 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 LRRK1Q38SD2 2015 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 OR2C1O95371 312 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 MCHR2Q969V1 340 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 TNFRSF10CO14798 259 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 SOCS1O15524 211 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 NXPH3O95157 252 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 CD8AP01732 235 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 ADCYAP1P18509 176 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 LPAR6P43657 344 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 RAB5CP51148 216 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 SCAND1P57086 179 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 POLR2GP62487 172 aaKnown RBP eCLIP12.78□□□□□ -0.36
EPHB4-210ENST00000616502 GNMTQ14749 295 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 RNF212Q495C1 297 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 C4orf17Q53FE4 359 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 HIST2H3AQ71DI3 136 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 OR8U1Q8NH10 309 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 KCNG3Q8TAE7 436 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 SHDQ96IW2 340 aa12.78□□□□□ -0.36
EPHB4-210ENST00000616502 A0A1W2PP11 408 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 IKZF1Q13422 519 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 TMEM182Q6ZP80 229 aaPredicted RBP12.77□□□□□ -0.36
EPHB4-210ENST00000616502 SSX9Q7RTT3 188 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 BHLHE23Q8NDY6 225 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 AKR7LQ8NHP1 331 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 UTP23Q9BRU9 249 aaKnown RBP12.77□□□□□ -0.36
EPHB4-210ENST00000616502 FBXL17Q9UF56 701 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 HS3ST3A1Q9Y663 406 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 AKAP6Q13023 2319 aa12.77□□□□□ -0.36
EPHB4-210ENST00000616502 CD37P11049 281 aa12.77□□□□□ -0.37
EPHB4-210ENST00000616502 OPRM1P35372 400 aa12.77□□□□□ -0.37
EPHB4-210ENST00000616502 UBE2KP61086 200 aa12.77□□□□□ -0.37
EPHB4-210ENST00000616502 NKX6-1P78426 367 aaPredicted RBP12.77□□□□□ -0.37
EPHB4-210ENST00000616502 GUK1Q16774 197 aa12.77□□□□□ -0.37
EPHB4-210ENST00000616502 MICBQ29980 383 aa12.77□□□□□ -0.37
EPHB4-210ENST00000616502 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.37
EPHB4-210ENST00000616502 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
EPHB4-210ENST00000616502 SLAMF6Q96DU3 332 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms