RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SEH1LQ96EE3 360 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 CCT8L2Q96SF2 557 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 TOR3AQ9H497 397 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 VNN3Q9NY84 501 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 DNAJC27Q9NZQ0 273 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 RNF114Q9Y508 228 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 KPTNQ9Y664 436 aa17.12■□□□□ 0.33
TRAPPC3-208ENST00000616074 MXRA7P84157 204 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 SPATS1Q496A3 300 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 FAM57BQ71RH2 274 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 FAM216BQ8N7L0 139 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 LY6G5BQ8NDX9 201 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 OR6N2Q8NGY6 317 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 LINC01006Q8NI28 216 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 RNF133Q8WVZ7 376 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 MED20Q9H944 212 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 NDE1Q9NXR1 346 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 ACTR3BQ9P1U1 418 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 ZNF319Q9P2F9 582 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 ONECUT1Q9UBC0 465 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 U3KQV3 271 aa17.11■□□□□ 0.33
TRAPPC3-208ENST00000616074 A0A1B0GVI7 797 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 TCRBV5S2A0A599 114 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 ACOT8O14734 319 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 TIPRLO75663 272 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 IFNGP01579 166 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 BLVRAP53004 296 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 ZNF121P58317 390 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 GFOD2Q3B7J2 385 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 ERI1Q8IV48 349 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 INTS14Q96SY0 518 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 AMELYQ99218 206 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 ABHD6Q9BV23 337 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 DGCR6LQ9BY27 220 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 RHBDD3Q9Y3P4 386 aa17.1■□□□□ 0.33
TRAPPC3-208ENST00000616074 FAM183AA6NL82 134 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 RIIAD1A6NNX1 92 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 M0QZ24 198 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 CDIPTO14735 213 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 ZNF3P17036 446 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 AMY2BP19961 511 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 GSK3AP49840 483 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 MICAQ29983 383 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 SLC36A1Q7Z2H8 476 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 PAPOLGQ9BWT3 736 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 TLNRD1Q9H1K6 362 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 SEMA6AQ9H2E6 1030 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 SP140LQ9H930 580 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 BRD7Q9NPI1 651 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 SIRT7Q9NRC8 400 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 CMC2Q9NRP2 79 aa17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 SAMHD1Q9Y3Z3 626 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-208ENST00000616074 TIMM23O14925 209 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 CLPXO76031 633 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 APOC1P02654 83 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 GNALP38405 381 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 OPRL1P41146 370 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 NAA10P41227 235 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 PROK1P58294 105 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 PRB3Q04118 309 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 IKZF1Q13422 519 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 STUMQ69YW2 141 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 ASPHD2Q6ICH7 369 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 IQCF1Q8N6M8 205 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 OR52H1Q8NGJ2 320 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 C12orf43Q96C57 262 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 ITPKCQ96DU7 683 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 NIPSNAP1Q9BPW8 284 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 OR10A2Q9H208 303 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 MMP27Q9H306 513 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 MAGIXQ9H6Y5 334 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 REEP1Q9H902 201 aa17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 PRPF19Q9UMS4 504 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-208ENST00000616074 NDUFB3O43676 98 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 SELLP14151 372 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 CFL1P23528 166 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 GSTT1P30711 240 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 DLX1P56177 255 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 GMFBP60983 142 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 TAF9Q16594 264 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 OR2T5Q6IEZ7 315 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 METAP1DQ6UB28 335 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 Q6ZSV7 163 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 GALNT4Q8N4A0 578 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 CSNK2A3Q8NEV1 391 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 OR5T2Q8NGG2 359 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 OR2T29Q8NH02 315 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 OTULINQ96BN8 352 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 PGAM5Q96HS1 289 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 MICU1Q9BPX6 476 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 RBM4BQ9BQ04 359 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 DCTN5Q9BTE1 182 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 DPAGT1Q9H3H5 408 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 ZNRD1Q9P1U0 126 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 DNAJB11Q9UBS4 358 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 ARL2BPQ9Y2Y0 163 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 FAM96BQ9Y3D0 163 aa17.07■□□□□ 0.32
TRAPPC3-208ENST00000616074 RNASEK-C17orf49H0YIS7 233 aa17.06■□□□□ 0.32
TRAPPC3-208ENST00000616074 GLCEO94923 617 aa17.06■□□□□ 0.32
TRAPPC3-208ENST00000616074 TGM4P49221 684 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms