RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 ALKBH3Q96Q83 286 aaPredicted RBP4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC38A2Q96QD8 506 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 ARHGDIGQ99819 225 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 KLHDC3Q9BQ90 382 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 KATNB1Q9BVA0 655 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 ULBP2Q9BZM5 246 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 LRMDAQ9H2I8 198 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 LIME1Q9H400 295 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 C1orf198Q9H425 327 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 ZNF385DQ9H6B1 395 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 SP140LQ9H930 580 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 EFCAB1Q9HAE3 211 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 NANSQ9NR45 359 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC7A10Q9NS82 523 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 CBLN4Q9NTU7 201 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 ZNF701Q9NV72 531 aaPredicted RBP4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 FAM118AQ9NWS6 357 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 ZNF229Q9UJW7 825 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 POFUT2Q9Y2G5 429 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC25A15Q9Y619 301 aa4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 HRNRQ86YZ3 2850 aaPredicted RBP4.37□□□□□ -1.71
CSNK1A1-211ENST00000606826 HIVEP1P15822 2718 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ARID1AO14497 2285 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ELOVL7A1L3X0 281 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 CPSF4LA6NMK7 179 aaKnown RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ZNF99A8MXY4 864 aaPredicted RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 FTCDNL1E5RQL4 147 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 TRIM77I1YAP6 450 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 RNF13O43567 381 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 DCTN3O75935 186 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 UBL3O95164 117 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 IGHG1P01857 330 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 AMBPP02760 352 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 IFNW1P05000 195 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC25A16P16260 332 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 CDH2P19022 906 aaPredicted RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 PRDX6P30041 224 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ZNF83P51522 516 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 PRRX1P54821 245 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 RAB4BP61018 213 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 GALK2Q01415 458 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 RAB35Q15286 201 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 MAPK11Q15759 364 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ADIPOQQ15848 244 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 NANOGP8Q6NSW7 305 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 DEGS2Q6QHC5 323 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 UGT2A3Q6UWM9 527 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 HACD2Q6Y1H2 254 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 PQLC2Q6ZP29 291 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 TRPM8Q7Z2W7 1104 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 PIWIL3Q7Z3Z3 882 aaKnown RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 CPLX4Q7Z7G2 160 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 TPRA1Q86W33 373 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 PTOV1Q86YD1 416 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 MICU2Q8IYU8 434 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 MUC15Q8N387 334 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ICA1LQ8NDH6 482 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 CSNK2A3Q8NEV1 391 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 KBTBD8Q8NFY9 601 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 OR1K1Q8NGR3 316 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 VANGL1Q8TAA9 524 aaPredicted RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 GEMIN6Q8WXD5 167 aaKnown RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 TAAR8Q969N4 342 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 FAM162AQ96A26 154 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 DNAJA3Q96EY1 480 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC41A3Q96GZ6 507 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 PRRC1Q96M27 445 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 NSMCE2Q96MF7 247 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 KCTD14Q9BQ13 255 aaPredicted RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 MRPL37Q9BZE1 423 aaKnown RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 VCXQ9H320 206 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 NANOGQ9H9S0 305 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC52A3Q9NQ40 469 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 SAR1AQ9NR31 198 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC35D1Q9NTN3 355 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 RPS6KA6Q9UK32 745 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC7A7Q9UM01 511 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 ERGIC3Q9Y282 383 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 MED31Q9Y3C7 131 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 CEPT1Q9Y6K0 416 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 C2CD3Q4AC94 2353 aa4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 RAI1Q7Z5J4 1906 aaPredicted RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 FLNAP21333 2647 aaKnown RBP4.36□□□□□ -1.71
CSNK1A1-211ENST00000606826 MAP1AP78559 2803 aaPredicted RBP4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 EFCAB10A6NFE3 127 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 DPRXA6NFQ7 191 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 SHISA9B4DS77 424 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 H7C417 338 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 VCYO14598 125 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 LDLRAD4O15165 306 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 SLC22A1O15245 554 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 SPINT2O43291 252 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 TRAF3IP2O43734 574 aaPredicted RBP4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 BCL10O95999 233 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 PNPP00491 289 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 BGLAPP02818 100 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 MT-ND1P03886 318 aa4.35□□□□□ -1.71
CSNK1A1-211ENST00000606826 OPN1SWP03999 348 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms