RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 hCG_38984A0A1B0GV85 526 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MBD3L4A6NDZ8 208 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MBD3L3A6NE82 208 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MBD3L5A6NJ08 208 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GMDSO60547 372 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GABRA1P14867 456 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GDNFP39905 211 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 UNC119Q13432 240 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GPR176Q14439 515 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GABRA6Q16445 453 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MOGAT2Q3SYC2 334 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 ZNF324BQ6AW86 544 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MZT2BQ6NZ67 158 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MBD3L2Q8NHZ7 208 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 RGCCQ9H4X1 137 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 RBFOX1Q9NWB1 397 aaKnown RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 NLKQ9UBE8 527 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 FAM240BA0A1B0GVZ2 78 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GABARAPH6UMI1 98 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 XRCC2O43543 280 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GSTZ1O43708 216 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 ALDOBP05062 364 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 CELA3BP08861 270 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 GK2Q14410 553 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 SF3B4Q15427 424 aaKnown RBP eCLIP16.62■□□□□ 0.251e-13■■□□□ 11.7
TUBB4B-202ENST00000604929 CRIP3Q6Q6R5 217 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 UTS2BQ765I0 119 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 C1QL2Q7Z5L3 287 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 MYPOPQ86VE0 399 aaPredicted RBP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 ACBD4Q8NC06 268 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 CCDC54Q8NEL0 328 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 SSC4DQ8WTU2 575 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 AKAP1Q92667 903 aaKnown RBP eCLIP16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 C10orf35Q96D05 121 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 PROCRQ9UNN8 238 aa16.62■□□□□ 0.25
TUBB4B-202ENST00000604929 A0A1W2PP11 408 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 FAM230AA0A1W2PPH8 454 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 FIGNL2A6NMB9 653 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 WDR1O75083 606 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 BPNT1O95861 308 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 IL2RAP01589 272 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 SERPINA5P05154 406 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 FCER2P06734 321 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 PRF1P14222 555 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 QRFPP83859 136 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 C1orf185Q5T7R7 199 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 TMEM104Q8NE00 496 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 SLC30A7Q8NEW0 376 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 PIGCQ92535 297 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 ZNF75AQ96N20 296 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 RABL2AQ9UBK7 228 aaPredicted RBP16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 ZNF391Q9UJN7 358 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 RAB22AQ9UL26 194 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 RABL2BQ9UNT1 228 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 CACNG2Q9Y698 323 aa16.61■□□□□ 0.25
TUBB4B-202ENST00000604929 MEIS3P1A6NDR6 274 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 C1QTNF9BB2RNN3 333 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 C1QTNF9P0C862 333 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 UCNP55089 124 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 GUCA2AQ02747 115 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 LINC00303Q3SY05 128 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 PRR30Q53SZ7 412 aaPredicted RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 GABRG1Q8N1C3 465 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 FAM57AQ8TBR7 257 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 APOBEC3DQ96AK3 386 aaPredicted RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 SNRNP40Q96DI7 357 aaKnown RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 RNF170Q96K19 258 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 BANF2Q9H503 90 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 PTTG3PQ9NZH4 202 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 ELF5Q9UKW6 265 aaPredicted RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 ING4Q9UNL4 249 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 TLN1Q9Y490 2541 aaKnown RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 DHRS7CA6NNS2 312 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 AGFG2O95081 481 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 NRASP01111 189 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 CGAP01215 116 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 WNT5AP41221 380 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 PTGFRP43088 359 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 ID4P47928 161 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 IDH3GP51553 393 aaPredicted RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 MTCP1P56278 107 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 SLC22A6Q4U2R8 563 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 DPPA2Q7Z7J5 298 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 CXorf67Q86X51 503 aaPredicted RBP16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 SPSB4Q96A44 273 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 CMBLQ96DG6 245 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 POFUT1Q9H488 388 aa16.6■□□□□ 0.25
TUBB4B-202ENST00000604929 ZGRF1Q86YA3 2104 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 CNOT4O95628 575 aaKnown RBP16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 IL32P24001 234 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 MALLQ13021 153 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 OR8B8Q15620 311 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 CLVS2Q5SYC1 327 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 PRR14LQ5THK1 2151 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 CDH26Q8IXH8 852 aa16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 PNLDC1Q8NA58 520 aaKnown RBP16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 C1orf147Q96MC9 270 aaPredicted RBP16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 REPIN1Q9BWE0 567 aaKnown RBP16.59■□□□□ 0.25
TUBB4B-202ENST00000604929 METTL21EPA6NDL7 271 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms