RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 CDIPTO14735 213 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 LHBP01229 141 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 TFF1P04155 84 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 ZNF3P17036 446 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 POU1F1P28069 291 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 GSTT1P30711 240 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 DDOSTP39656 456 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 GSK3AP49840 483 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 ZNF121P58317 390 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 MICAQ29983 383 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 WDR38Q5JTN6 314 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 KCTD8Q6ZWB6 473 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 C11orf53Q8IXP5 236 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 OR1M1Q8NGA1 313 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 TEX47Q8TBZ9 253 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 H1FXQ92522 213 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 ABHD6Q9BV23 337 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 NMNAT2Q9BZQ4 307 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 OR10A2Q9H208 303 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 SEMA6AQ9H2E6 1030 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 ACTR3BQ9P1U1 418 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 RPUSD1Q9UJJ7 312 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 RHBDD3Q9Y3P4 386 aa14.52□□□□□ -0.09
SHKBP1-223ENST00000600552 A0A1B0GUS0 222 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 NDUFB3O43676 98 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 GPR137BO60478 399 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 DCTN3O75935 186 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 ECDO95905 644 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 H2BFMP0C1H6 154 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 NAA10P41227 235 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 DLX1P56177 255 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 TEX30Q5JUR7 227 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 TEX36Q5VZQ5 186 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 OR2T5Q6IEZ7 315 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 DHFR2Q86XF0 187 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 TMEM86BQ8N661 226 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 OR10G2Q8NGC3 310 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 OR2T29Q8NH02 315 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 SPSB4Q96A44 273 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 AMELYQ99218 206 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 MICU1Q9BPX6 476 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 SP140LQ9H930 580 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 SIRT7Q9NRC8 400 aa14.51□□□□□ -0.09
SHKBP1-223ENST00000600552 TCRBV5S2A0A599 114 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 ACOT8O14734 319 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 BLVRAP53004 296 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 FAM98BQ52LJ0 330 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 LINC01590Q5TEZ4 76 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 WDR82Q6UXN9 313 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 SLC36A1Q7Z2H8 476 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 THEM6Q8WUY1 208 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 RPL3LQ92901 407 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 NIPSNAP1Q9BPW8 284 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 TOR3AQ9H497 397 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 RNPEPL1Q9HAU8 725 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 ZNF319Q9P2F9 582 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 RNF114Q9Y508 228 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 POMT1Q9Y6A1 747 aa14.5□□□□□ -0.09
SHKBP1-223ENST00000600552 ANXA2P2A6NMY6 339 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 ZNF850A8MQ14 1090 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 NDUFA7O95182 113 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 APOC1P02654 83 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 SELLP14151 372 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 MUC1P15941 1255 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 MNAT1P51948 309 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 KRTAP10-3P60369 221 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 SPATS1Q496A3 300 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 CDONQ4KMG0 1287 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 KLHL12Q53G59 568 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 PDLIM3Q53GG5 364 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 OR52H1Q8NGJ2 320 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 RNF133Q8WVZ7 376 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 PIGCQ92535 297 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 DYRK2Q92630 601 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 DGCR6LQ9BY27 220 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 CMC2Q9NRP2 79 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 ZNF391Q9UJN7 358 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 PRPF19Q9UMS4 504 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 CMYA5Q8N3K9 4069 aa14.49□□□□□ -0.09
SHKBP1-223ENST00000600552 hCG_38984A0A1B0GV85 526 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 SELENOFO60613 162 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 GLCEO94923 617 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 MAGEA2P43356 314 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 IER3P46695 156 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 MS4A2Q01362 244 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 PRDX4Q13162 271 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 KLRD1Q13241 179 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 LRRC10Q5BKY1 277 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 SHFQ7M4L6 423 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 PIGWQ7Z7B1 504 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 TIGD4Q8IY51 512 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 CMTM4Q8IZR5 234 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 PNKDQ8N490 385 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 CSNK2A3Q8NEV1 391 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 GIPC3Q8TF64 312 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 UBE2FQ969M7 185 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 LRGUKQ96M69 825 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms