RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 FAHD2BQ6P2I3 314 aaPredicted RBP23.67■■□□□ 1.38
SSBP4-206ENST00000599699 PRIMA1Q86XR5 153 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 PPP1R14AQ96A00 147 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 RNFT2Q96EX2 444 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 FAHD2AQ96GK7 314 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 FAM71F1Q96KD3 344 aaPredicted RBP23.67■■□□□ 1.38
SSBP4-206ENST00000599699 MICU1Q9BPX6 476 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 PPP1R3EQ9H7J1 279 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 MOB1AQ9H8S9 216 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 PATZ1Q9HBE1 687 aaKnown RBP23.67■■□□□ 1.38
SSBP4-206ENST00000599699 GPR84Q9NQS5 396 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 FAM118AQ9NWS6 357 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 AASSQ9UDR5 926 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 PPIAL4AQ9Y536 164 aa23.67■■□□□ 1.38
SSBP4-206ENST00000599699 hCG_1807616A0A1W2PRN6 198 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 ZNF850A8MQ14 1090 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 PTBP3O95758 552 aaKnown RBP23.66■■□□□ 1.38
SSBP4-206ENST00000599699 PNPP00491 289 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 SRD5A1P18405 259 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 MAP2K3P46734 347 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 LCN2P80188 198 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 IL5RAQ01344 420 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 GABPB1Q06547 395 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-206ENST00000599699 PRDX4Q13162 271 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 PIGCQ92535 297 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 TMEM165Q9HC07 324 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 SMPD3Q9NY59 655 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-206ENST00000599699 OR52A1Q9UKL2 312 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 MPC1Q9Y5U8 109 aa23.66■■□□□ 1.38
SSBP4-206ENST00000599699 METTL15A6NJ78 407 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 MPZL2O60487 215 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 KRTAP21-3Q3LHN1 58 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 ENTHD1Q8IYW4 607 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 ZNF555Q8NEP9 628 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 DEFB108BQ8NET1 73 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 ABCB9Q9NP78 766 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 SNX5Q9Y5X3 404 aa23.65■■□□□ 1.38
SSBP4-206ENST00000599699 CEACAM18A8MTB9 384 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 SRSF10O75494 262 aaKnown RBP23.64■■□□□ 1.37
SSBP4-206ENST00000599699 CST4P01036 141 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 IFNA2P01563 188 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 SRP14P37108 136 aaKnown RBP23.64■■□□□ 1.37
SSBP4-206ENST00000599699 ZNF826PQ6ZT77 177 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 THAP5Q7Z6K1 395 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 C19orf18Q8NEA5 215 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 SEMA6DQ8NFY4 1073 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 Q96MT0 163 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 HIST1H2AAQ96QV6 131 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 TMEM246Q9BRR3 403 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 RTL8AQ9BWD3 113 aa23.64■■□□□ 1.37
SSBP4-206ENST00000599699 ZNF816-ZNF321PA0A0X1KG74 233 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 FOXH1O75593 365 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 TTRP02766 147 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 RPS2P15880 293 aaKnown RBP23.63■■□□□ 1.37
SSBP4-206ENST00000599699 ACTC1P68032 377 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 ACTA1P68133 377 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 LPCAT4Q643R3 524 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 KCTD8Q6ZWB6 473 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 FAM220AQ7Z4H9 259 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 ZDHHC23Q8IYP9 409 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 OR1M1Q8NGA1 313 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 ITPKCQ96DU7 683 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 RDH12Q96NR8 316 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 G6PC2Q9NQR9 355 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 GNG8Q9UK08 70 aa23.63■■□□□ 1.37
SSBP4-206ENST00000599699 A0A0G2JMP0 313 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 A0A0X1KG70 313 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 DAPL1A0PJW8 107 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 MTRF1O75570 445 aaKnown RBP23.62■■□□□ 1.37
SSBP4-206ENST00000599699 SULT1C4O75897 302 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 ATP6V1B1P15313 513 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 HOXA4Q00056 320 aaPredicted RBP23.62■■□□□ 1.37
SSBP4-206ENST00000599699 RIPPLY1Q0D2K3 151 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 ZNF404Q494X3 552 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 ESCO2Q56NI9 601 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 DCAF12L2Q5VW00 463 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 LIPNQ5VXI9 398 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 WDR86Q86TI4 376 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 ELMOD2Q8IZ81 293 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 OR4M2Q8NGB6 313 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 RHOXF1Q8NHV9 184 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 MIOXQ9UGB7 285 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 PIGLQ9Y2B2 252 aa23.62■■□□□ 1.37
SSBP4-206ENST00000599699 F5H0A9 414 aaPredicted RBP23.61■■□□□ 1.37
SSBP4-206ENST00000599699 SLC16A6O15403 523 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 FSTL3O95633 263 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 GABRB1P18505 474 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 ZFP36P26651 326 aaKnown RBP23.61■■□□□ 1.37
SSBP4-206ENST00000599699 CD80P33681 288 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 SEC61A1P61619 476 aaKnown RBP23.61■■□□□ 1.37
SSBP4-206ENST00000599699 ZNF85Q03923 595 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 TP53I3Q53FA7 332 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 SFRP4Q6FHJ7 346 aaPredicted RBP23.61■■□□□ 1.37
SSBP4-206ENST00000599699 OR5P3Q8WZ94 311 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 ITFG2Q969R8 447 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 RNF170Q96K19 258 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 SLC22A13Q9Y226 551 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 PCDHGB1Q9Y5G3 927 aa23.61■■□□□ 1.37
SSBP4-206ENST00000599699 C3orf80F5H4A9 247 aa23.6■■□□□ 1.37
SSBP4-206ENST00000599699 P2RY10O00398 339 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms