RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 MICAQ29983 383 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 SLC36A3Q495N2 470 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 RHOUQ7L0Q8 258 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 WDR86Q86TI4 376 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 FAM90A1Q86YD7 464 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 OR10G2Q8NGC3 310 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 OR56B2PQ8NGI1 322 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 OR51L1Q8NGJ5 315 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 OR8D4Q8NGM9 314 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 WDFY2Q96P53 400 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 COMMD3-BMI1R4GMX3 469 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 OOEPA6NGQ2 149 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 P2RY10O00398 339 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 BHLHE40O14503 412 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 TOX4O94842 621 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 NDUFA7O95182 113 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 GYPAP02724 150 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 NPY4RP50391 375 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 HMGA2P52926 109 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 POU4F2Q12837 409 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 OR8B8Q15620 311 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
IRF3-223ENST00000599223 LNX2Q8N448 690 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 OR9Q1Q8NGQ5 310 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 CITED1Q99966 193 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 ANKRD60Q9BZ19 345 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 NOX4Q9NPH5 578 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 C1orf123Q9NWV4 160 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 VNN3Q9NY84 501 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 KCNG2Q9UJ96 466 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 CDH10Q9Y6N8 788 aa12.13□□□□□ -0.47
IRF3-223ENST00000599223 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 A0A0U1RQK1 487 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 MAGEA13PA6NCF6 341 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 IGHV4-59P01825 116 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PRKACGP22612 351 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
IRF3-223ENST00000599223 TSPAN31Q12999 210 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 ZIK1Q3SY52 487 aaPredicted RBP12.12□□□□□ -0.47
IRF3-223ENST00000599223 OLFML2AQ68BL7 652 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 DCXRQ7Z4W1 244 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PDZD9Q8IXQ8 264 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 HS3ST5Q8IZT8 346 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 TMEM86BQ8N661 226 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 SETD9Q8NE22 299 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PROKR2Q8NFJ6 384 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 LHX4Q969G2 390 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 SPTSSAQ969W0 71 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 TOR3AQ9H497 397 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 RIBC2Q9H4K1 309 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PPP1R3EQ9H7J1 279 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 PAPOLBQ9NRJ5 636 aaKnown RBP12.12□□□□□ -0.47
IRF3-223ENST00000599223 ACOXLQ9NUZ1 547 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 MRPL15Q9P015 296 aaKnown RBP12.12□□□□□ -0.47
IRF3-223ENST00000599223 ERVK-18Q9QC07 812 aa12.12□□□□□ -0.47
IRF3-223ENST00000599223 GGT3PA6NGU5 568 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 A6NLC8 198 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.11□□□□□ -0.47
IRF3-223ENST00000599223 DVL1O14640 695 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 IDH3BO43837 385 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 GMDSO60547 372 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 GYPBP06028 91 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 GRPP07492 148 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 SPARCP09486 303 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 CLUP10909 449 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 ZNF823P16415 610 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 PRKXP51817 358 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 BPIFB3P59826 476 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 CSNK2BP67870 215 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 IL18R1Q13478 541 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 KDM4DQ6B0I6 523 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 FAHD1Q6P587 224 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 DRAM2Q6UX65 266 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 C17orf107Q6ZR85 190 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 SLC37A3Q8NCC5 494 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 OR4C15Q8NGM1 316 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 GATAD2BQ8WXI9 593 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 COPS4Q9BT78 406 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 SLC22A4Q9H015 551 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 BEX1Q9HBH7 125 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 POMT1Q9Y6A1 747 aa12.11□□□□□ -0.47
IRF3-223ENST00000599223 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
IRF3-223ENST00000599223 A0A1B0GUS0 222 aa12.1□□□□□ -0.47
IRF3-223ENST00000599223 hCG_1807616A0A1W2PRN6 198 aa12.1□□□□□ -0.47
IRF3-223ENST00000599223 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
IRF3-223ENST00000599223 GPR137BO60478 399 aa12.1□□□□□ -0.47
IRF3-223ENST00000599223 TNFAIP8O95379 198 aa12.1□□□□□ -0.47
IRF3-223ENST00000599223 LHBP01229 141 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms