RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 MRPL21Q7Z2W9 205 aaKnown RBP10.34□□□□□ -0.75
TRIM28-212ENST00000597995 TIGD4Q8IY51 512 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 SPERTQ8NA61 448 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 ZSCAN4Q8NAM6 433 aaPredicted RBP10.34□□□□□ -0.75
TRIM28-212ENST00000597995 OR6K6Q8NGW6 343 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 TEX47Q8TBZ9 253 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 SPTSSAQ969W0 71 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 KCNJ15Q99712 375 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 PKP2Q99959 881 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 DPAGT1Q9H3H5 408 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 CENPMQ9NSP4 180 aa10.34□□□□□ -0.75
TRIM28-212ENST00000597995 OOEPA6NGQ2 149 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 C3orf80F5H4A9 247 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 GNGT2O14610 69 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 DNAJC8O75937 253 aaPredicted RBP10.33□□□□□ -0.76
TRIM28-212ENST00000597995 GLCEO94923 617 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 IFNGP01579 166 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 IGHV4-59P01825 116 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF3P17036 446 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 POU1F1P28069 291 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 CBX1P83916 185 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 CDK5Q00535 292 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 MZT1Q08AG7 82 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 BNIP1Q12981 228 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 OR8B8Q15620 311 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 TMEM236Q5W0B7 351 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 DRAM2Q6UX65 266 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 GDPGP1Q6ZNW5 385 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 PRSS45Q7RTY3 260 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 DPY19L4Q7Z388 723 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 LRTOMTQ8WZ04 291 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 LHX4Q969G2 390 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 DMRTB1Q96MA1 342 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 COPS4Q9BT78 406 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 ADAT1Q9BUB4 502 aaKnown RBP10.33□□□□□ -0.76
TRIM28-212ENST00000597995 ABHD6Q9BV23 337 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 C16orf95Q9H693 158 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 SMURF1Q9HCE7 757 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 MRPL15Q9P015 296 aaKnown RBP10.33□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 KAAG1Q9UBP8 84 aa10.33□□□□□ -0.76
TRIM28-212ENST00000597995 A0A0U1RQK1 487 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF878C9JN71 531 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 DVL1O14640 695 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 LHBP01229 141 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 OSMP13725 252 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 GSTT1P30711 240 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 ARF6P62330 175 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 EIF2B1Q14232 305 aaKnown RBP10.32□□□□□ -0.76
TRIM28-212ENST00000597995 PLBD1Q6P4A8 553 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 BTN2A1Q7KYR7 527 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 ERI1Q8IV48 349 aaKnown RBP10.32□□□□□ -0.76
TRIM28-212ENST00000597995 BOLLQ8N9W6 283 aaKnown RBP10.32□□□□□ -0.76
TRIM28-212ENST00000597995 SCCPDHQ8NBX0 429 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 BBS1Q8NFJ9 593 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 NPRL2Q8WTW4 380 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 UTP4Q969X6 686 aaKnown RBP10.32□□□□□ -0.76
TRIM28-212ENST00000597995 SPSB4Q96A44 273 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 INTS14Q96SY0 518 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 CNTD2Q9H8S5 307 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 TCF7L1Q9HCS4 588 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 DNAJB9Q9UBS3 223 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 N6AMT1Q9Y5N5 214 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 KPTNQ9Y664 436 aa10.32□□□□□ -0.76
TRIM28-212ENST00000597995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.31□□□□□ -0.76
TRIM28-212ENST00000597995 A0A1B0GVI7 797 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 GGT3PA6NGU5 568 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 SELENOFO60613 162 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 E2F6O75461 281 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 FCN3O75636 299 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 TIPRLO75663 272 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 GYPAP02724 150 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 ANXA8P13928 327 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 HOXB6P17509 224 aaKnown RBP10.31□□□□□ -0.76
TRIM28-212ENST00000597995 OPRL1P41146 370 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 CX3CR1P49238 355 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 DAPP51397 102 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 BLVRAP53004 296 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 CDONQ4KMG0 1287 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 TEX36Q5VZQ5 186 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 METAP1DQ6UB28 335 aaPredicted RBP10.31□□□□□ -0.76
TRIM28-212ENST00000597995 Q6ZSV7 163 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 CPOQ8IVL8 374 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 GCSAMQ8N6F7 178 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 OR56B2PQ8NGI1 322 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 OR6N2Q8NGY6 317 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 OTULINQ96BN8 352 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 SGK3Q96BR1 496 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 RASSF4Q9H2L5 321 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 PPP1R3EQ9H7J1 279 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 C14orf119Q9NWQ9 140 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 C1orf123Q9NWV4 160 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
TRIM28-212ENST00000597995 KLHDC2Q9Y2U9 406 aa10.31□□□□□ -0.76
TRIM28-212ENST00000597995 CAB39Q9Y376 341 aaPredicted RBP10.31□□□□□ -0.76
TRIM28-212ENST00000597995 FAM96BQ9Y3D0 163 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms