RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 OR8S1Q8NH09 359 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 SSMEM1Q8WWF3 244 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 ASB9Q96DX5 294 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 AMELYQ99218 206 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 CCL13Q99616 98 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 TSSK6Q9BXA6 273 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 CADM1Q9BY67 442 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 NMNAT2Q9BZQ4 307 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 MED20Q9H944 212 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 SIRT7Q9NRC8 400 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 IL20Q9NYY1 176 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 DNAJC27Q9NZQ0 273 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 KIF17Q9P2E2 1029 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 ZNF319Q9P2F9 582 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 RPUSD1Q9UJJ7 312 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 RNF114Q9Y508 228 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 POMT1Q9Y6A1 747 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 hCG_38984A0A1B0GV85 526 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 A0A1W2PRD5 423 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 A0A1W2PRF3 423 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 A0A1W2PRM7 423 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 TCRBV5S2A0A599 114 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 DHRS12A0PJE2 317 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 ZNF593O00488 134 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 ACOT8O14734 319 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 XRCC2O43543 280 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 TSPAN15O95858 294 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 LIPFP07098 398 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 AMY2BP19961 511 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 FMO3P31513 532 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 IER3P46695 156 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 EIF2B1Q14232 305 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 FLOT2Q14254 428 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 PDCD1Q15116 288 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 TAF9Q16594 264 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 TIGD6Q17RP2 521 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 FAM98BQ52LJ0 330 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 LINC01590Q5TEZ4 76 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 ASPHD2Q6ICH7 369 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 RPL13AP3Q6NVV1 102 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 WDR82Q6UXN9 313 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 RASSF6Q6ZTQ3 369 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 FAM57BQ71RH2 274 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 SPATA24Q86W54 205 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 LDLRAD3Q86YD5 345 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 PNKDQ8N490 385 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 AQP11Q8NBQ7 271 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 PLPP7Q8NBV4 271 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 OR1M1Q8NGA1 313 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 OR6N2Q8NGY6 317 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 LINC01006Q8NI28 216 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 DYRK2Q92630 601 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 SPSB4Q96A44 273 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 REEP6Q96HR9 211 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 BRD7Q9NPI1 651 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 TRIM36Q9NQ86 728 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 C14orf119Q9NWQ9 140 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 ONECUT1Q9UBC0 465 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 U3KQV3 271 aa9.96□□□□□ -0.82
SOX2-OT-228ENST00000597828 FAM183AA6NL82 134 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 ANKRD30BLA7E2S9 258 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 NDUFA2O43678 99 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 CCNB2O95067 398 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 HOXB6P17509 224 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 HSD11B1P28845 292 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 PROK1P58294 105 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 ZNF121P58317 390 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 IKZF1Q13422 519 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 CDONQ4KMG0 1287 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 C1orf146Q5VVC0 180 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 HIST2H2BDQ6DRA6 164 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 Q6ZSV7 163 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 PRSS45Q7RTY3 260 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 DPY19L4Q7Z388 723 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 ERI1Q8IV48 349 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 IQCF1Q8N6M8 205 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 SPERTQ8NA61 448 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 OR5T2Q8NGG2 359 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 TBC1D15Q8TC07 691 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 SGK3Q96BR1 496 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 RBM4BQ9BQ04 359 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 FGF23Q9GZV9 251 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 YY1AP1Q9H869 796 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 SNTG1Q9NSN8 517 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 KAAG1Q9UBP8 84 aa9.95□□□□□ -0.82
SOX2-OT-228ENST00000597828 AQP12BA6NM10 295 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 RNASEK-C17orf49H0YIS7 233 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 MAGEA2P43356 314 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 HMGA2P52926 109 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 SLC25A1P53007 311 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 C1QL4Q86Z23 238 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 AQP12AQ8IXF9 295 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 Q8N7P7 452 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 LY6G5BQ8NDX9 201 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 ABHD6Q9BV23 337 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 PAPOLGQ9BWT3 736 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 WDR13Q9H1Z4 485 aa9.94□□□□□ -0.82
SOX2-OT-228ENST00000597828 MMP27Q9H306 513 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms