RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CSF3P09919 207 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 DAOP14920 347 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 ZNF12P17014 697 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 GNALP38405 381 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 TAS2R43P59537 309 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 GABARAPL2P60520 117 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 CDK5R1Q15078 307 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 TESK1Q15569 626 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 CLEC2AQ6UVW9 174 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 ZNF485Q8NCK3 441 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 OR5AK2Q8NH90 309 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 UBASH3BQ8TF42 649 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 PAPOLGQ9BWT3 736 aaKnown RBP12.2□□□□□ -0.46
VRK3-213ENST00000597215 CCDC90BQ9GZT6 254 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 IL19Q9UHD0 177 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 RHBDD3Q9Y3P4 386 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 LRRC42Q9Y546 428 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 V9GYS6 101 aa12.2□□□□□ -0.46
VRK3-213ENST00000597215 TRBV2A0A0J9YWF9 115 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 H0YL77 283 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 CST4P01036 141 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 HLA-DPB1P04440 258 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 TNFRSF1AP19438 455 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 ACHEP22303 614 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 SRP9P49458 86 aaKnown RBP12.19□□□□□ -0.46
VRK3-213ENST00000597215 PDLIM4P50479 330 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
VRK3-213ENST00000597215 DSCR9P59020 149 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 MRPS11P82912 194 aaKnown RBP12.19□□□□□ -0.46
VRK3-213ENST00000597215 MZT1Q08AG7 82 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 IRF3Q14653 427 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 ZNF525Q8N782 197 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 SPERTQ8NA61 448 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 OR14K1Q8NGZ2 314 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 RPS4Y2Q8TD47 263 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 RDH5Q92781 318 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 OR2V2Q96R30 315 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 PLEKHA1Q9HB21 404 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 ENPP5Q9UJA9 477 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 HHLA2Q9UM44 414 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 PIGLQ9Y2B2 252 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 MPC1Q9Y5U8 109 aa12.19□□□□□ -0.46
VRK3-213ENST00000597215 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 ANXA2P2A6NMY6 339 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 F5H5P2 479 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 H3BSH0 61 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 OGG1O15527 345 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 MRPS14O60783 128 aaKnown RBP12.18□□□□□ -0.46
VRK3-213ENST00000597215 ZFPL1O95159 310 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 LALBAP00709 142 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 FAHP16930 419 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 CD200P41217 278 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 PRDX4Q13162 271 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 CARTPTQ16568 116 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 KRT74Q7RTS7 529 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 KRTAP1-3Q8IUG1 177 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 ZDHHC23Q8IYP9 409 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 RDH10Q8IZV5 341 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 CELF2-AS1Q8N7Q2 184 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 OR8S1Q8NH09 359 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 PIGCQ92535 297 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 SMIM19Q96E16 107 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 PDCD1LG2Q9BQ51 273 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 DLL4Q9NR61 685 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 MYO9AB2RTY4 2548 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
VRK3-213ENST00000597215 ZNF850A8MQ14 1090 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 CRYBB2P43320 205 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 CDH15P55291 814 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 BDH1Q02338 343 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 ACSM1Q08AH1 577 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 SPHARQ15513 63 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 TBCEQ15813 527 aaPredicted RBP12.17□□□□□ -0.46
VRK3-213ENST00000597215 DNM1P46Q6ZS02 220 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 FAM168AQ92567 244 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
VRK3-213ENST00000597215 C10orf35Q96D05 121 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 MICU1Q9BPX6 476 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 C14orf119Q9NWQ9 140 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 LRCH1Q9Y2L9 728 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 LSM2Q9Y333 95 aaKnown RBP12.17□□□□□ -0.46
VRK3-213ENST00000597215 SIRT4Q9Y6E7 314 aaPredicted RBP12.17□□□□□ -0.46
VRK3-213ENST00000597215 TANC2Q9HCD6 1990 aa12.17□□□□□ -0.46
VRK3-213ENST00000597215 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 NDUFS8O00217 210 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 CDC14BO60729 498 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 NRASP01111 189 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 MED22Q15528 200 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 HFEQ30201 348 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 KCTD21Q4G0X4 260 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 CLVS2Q5SYC1 327 aa12.16□□□□□ -0.46
VRK3-213ENST00000597215 TMEM42Q69YG0 159 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms