RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CD276Q5ZPR3 534 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 ZBTB46Q86UZ6 589 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 PNLDC1Q8NA58 520 aaKnown RBP12.69□□□□□ -0.38
LIG1-214ENST00000597146 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 SPTSSAQ969W0 71 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 COQ7Q99807 217 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 DGCR6LQ9BY27 220 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 KCNG2Q9UJ96 466 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 LHFPL6Q9Y693 200 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 TVP23AA6NH52 213 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 BHLHE40O14503 412 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ATP5HO75947 161 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 RAC2P15153 192 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ZNF3P17036 446 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 PAICSP22234 425 aaKnown RBP12.68□□□□□ -0.38
LIG1-214ENST00000597146 BLVRAP53004 296 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 CBX1P83916 185 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 OR2T2Q6IF00 324 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ZNF770Q6IQ21 691 aaPredicted RBP12.68□□□□□ -0.38
LIG1-214ENST00000597146 ADGRG5Q8IZF4 528 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 LNX2Q8N448 690 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 OR9Q1Q8NGQ5 310 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 OR6K6Q8NGW6 343 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ZNF582Q96NG8 517 aaPredicted RBP12.68□□□□□ -0.38
LIG1-214ENST00000597146 ATF6BQ99941 703 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 CENPMQ9NSP4 180 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ARMC1Q9NVT9 282 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 VNN3Q9NY84 501 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ERVK-18Q9QC07 812 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ATPIF1Q9UII2 106 aa12.68□□□□□ -0.38
LIG1-214ENST00000597146 ADARB2-AS1A8MUL3 147 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 GSC2O15499 205 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 SPARCP09486 303 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 CD28P10747 220 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 DLX1P56177 255 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 SLC18B1Q6NT16 456 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 BHLHE23Q8NDY6 225 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 OR8G5Q8NG78 346 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 OR4C13Q8NGP0 309 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 B9D2Q9BPU9 175 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 DNAJB9Q9UBS3 223 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 DNAJB11Q9UBS4 358 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 POMPQ9Y244 141 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 DNAH7Q8WXX0 4024 aa12.67□□□□□ -0.38
LIG1-214ENST00000597146 J3QW42 95 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
LIG1-214ENST00000597146 ADAM20O43506 726 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 FAM20BO75063 409 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 FKBP6O75344 327 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 FBXO24O75426 580 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 HLA-DPB1P04440 258 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 HMGN1P05114 100 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 GYPBP06028 91 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 IRF2P14316 349 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 GGT2P36268 569 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 KIR2DS4P43632 304 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 CRMP1Q14194 572 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 SFRP4Q6FHJ7 346 aaPredicted RBP12.66□□□□□ -0.38
LIG1-214ENST00000597146 C11orf88Q6PI97 169 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 HIST2H3AQ71DI3 136 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 PNKDQ8N490 385 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 OR4F17Q8NGA8 305 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 OR8D4Q8NGM9 314 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 OR13G1Q8NGZ3 307 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 OR5R1Q8NH85 324 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 OR2T6Q8NHC8 308 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 SPRYD4Q8WW59 207 aaPredicted RBP12.66□□□□□ -0.38
LIG1-214ENST00000597146 SLC7A6OSQ96CW6 309 aaPredicted RBP12.66□□□□□ -0.38
LIG1-214ENST00000597146 OR4F4Q96R69 305 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 LYSTQ99698 3801 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 NIPSNAP1Q9BPW8 284 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 WDR76Q9H967 626 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 SIRT7Q9NRC8 400 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 UFSP2Q9NUQ7 469 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 GAR1Q9NY12 217 aaKnown RBP12.66□□□□□ -0.38
LIG1-214ENST00000597146 CYB5R1Q9UHQ9 305 aa12.66□□□□□ -0.38
LIG1-214ENST00000597146 H3BUX3 64 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 ANXA8P13928 327 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 CD33P20138 364 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 PRKACGP22612 351 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 GRK5P34947 590 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 SLC15A1P46059 708 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 ENTPD1P49961 510 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 SLC25A1P53007 311 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 RAD23AP54725 363 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 PRSS12P56730 875 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 BNIP1Q12981 228 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 KLRD1Q13241 179 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 GINS1Q14691 196 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 LY6EQ16553 131 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 CFAP77Q6ZQR2 320 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 BTN2A1Q7KYR7 527 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms