RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 DYSFO75923 2080 aa8.77□□□□□ -1.01
CCDC9-203ENST00000596938 A0A0U1RQV5 110 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 A6NLC8 198 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 ZAR1LA6NP61 321 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 TRIM77I1YAP6 450 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 PRKYO43930 277 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 MITFO75030 526 aaPredicted RBP8.76□□□□□ -1.01
CCDC9-203ENST00000596938 LIPFP07098 398 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 EPHA2P29317 976 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 GNALP38405 381 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 PSMA6P60900 246 aaKnown RBP8.76□□□□□ -1.01
CCDC9-203ENST00000596938 ARMCX4Q5H9R4 360 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 FAM76BQ5HYJ3 339 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 TEX36Q5VZQ5 186 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 C12orf73Q69YU5 71 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 SFRP4Q6FHJ7 346 aaPredicted RBP8.76□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF826PQ6ZT77 177 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 AMIGO2Q86SJ2 522 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF679Q8IYX0 411 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 GCSAMQ8N6F7 178 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.76□□□□□ -1.01
CCDC9-203ENST00000596938 C19orf18Q8NEA5 215 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 OR1M1Q8NGA1 313 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 LRTOMTQ8WZ04 291 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 ITPKCQ96DU7 683 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 LYZL4Q96KX0 146 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 MNTQ99583 582 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 SLC6A7Q99884 636 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 MICU1Q9BPX6 476 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 NUDT16L1Q9BRJ7 211 aaKnown RBP8.76□□□□□ -1.01
CCDC9-203ENST00000596938 MROQ9BYG7 248 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 TLNRD1Q9H1K6 362 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 HAO2Q9NYQ3 351 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 H2AFY2Q9P0M6 372 aaPredicted RBP8.76□□□□□ -1.01
CCDC9-203ENST00000596938 ERVK-18Q9QC07 812 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 KAAG1Q9UBP8 84 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 LRP12Q9Y561 859 aa8.76□□□□□ -1.01
CCDC9-203ENST00000596938 TANC2Q9HCD6 1990 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 TMEM269A0A1B0GVZ9 245 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 hCG_1807616A0A1W2PRN6 198 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 SLC22A31A6NKX4 558 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 ANXA2P2A6NMY6 339 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 C3orf80F5H4A9 247 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 ATP6V1B1P15313 513 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 MUC1P15941 1255 aaPredicted RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 ACKR3P25106 362 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 MAP2K3P46734 347 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 HOXA4Q00056 320 aaPredicted RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 MICBQ29980 383 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 NXNL2Q5VZ03 156 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 RBMS3Q6XE24 437 aaKnown RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 C9orf139Q6ZV77 190 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 ASRGL1Q7L266 308 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 DOK3Q7L591 496 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 WDR86Q86TI4 376 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 FAM90A1Q86YD7 464 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 TCEANCQ8N8B7 351 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 ZDHHC22Q8N966 263 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 BOLLQ8N9W6 283 aaKnown RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 OR8B12Q8NGG6 310 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 TMEM163Q8TC26 289 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 C22orf15Q8WYQ4 148 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 OR5P3Q8WZ94 311 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 C12orf43Q96C57 262 aaKnown RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 CENPNQ96H22 339 aaPredicted RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 OR8B4Q96RC9 309 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 PAPOLGQ9BWT3 736 aaKnown RBP8.75□□□□□ -1.01
CCDC9-203ENST00000596938 OSBPL10Q9BXB5 764 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 PPP1R3EQ9H7J1 279 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 FAM206AQ9NX38 181 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF69Q9UC07 566 aa8.75□□□□□ -1.01
CCDC9-203ENST00000596938 TMEM210A6NLX4 147 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF850A8MQ14 1090 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 CDIPTO14735 213 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ADAM20O43506 726 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ENSAO43768 121 aaKnown RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 CIB2O75838 187 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 RGS9O75916 674 aaPredicted RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ECDO95905 644 aaPredicted RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 PLATP00750 562 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 IGLV3-1P01715 115 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 GYPAP02724 150 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 MRPL3P09001 348 aaKnown RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 COMPP49747 757 aaPredicted RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 RIDAP52758 137 aaKnown RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 BPIFB3P59826 476 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ACTR3P61158 418 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 PRDX4Q13162 271 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ATPAF1Q5TC12 328 aaPredicted RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 WDR82Q6UXN9 313 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 BCDIN3DQ7Z5W3 292 aaKnown RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 SIGLECL1Q8N7X8 197 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 OR10Z1Q8NGY1 313 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 HIST1H2AAQ96QV6 131 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 CNN2Q99439 309 aaKnown RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 CIB1Q99828 191 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 RTL8AQ9BWD3 113 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 MS4A7Q9GZW8 240 aaPredicted RBP8.74□□□□□ -1.01
CCDC9-203ENST00000596938 PBOV1Q9GZY1 135 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms