RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FAM206AQ9NX38 181 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 H2AFY2Q9P0M6 372 aaPredicted RBP10.9□□□□□ -0.66
USE1-207ENST00000596136 RHBDD3Q9Y3P4 386 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 MPC1Q9Y5U8 109 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 TMEM269A0A1B0GVZ9 245 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 PHYHO14832 338 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 SRSF10O75494 262 aaKnown RBP10.89□□□□□ -0.67
USE1-207ENST00000596136 ALPLP05186 524 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 GRPP07492 148 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 MRPL3P09001 348 aaKnown RBP10.89□□□□□ -0.67
USE1-207ENST00000596136 PPIAL4GP0DN37 164 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 RPS2P15880 293 aaKnown RBP10.89□□□□□ -0.67
USE1-207ENST00000596136 ADRA2CP18825 462 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 KPNB1Q14974 876 aaKnown RBP10.89□□□□□ -0.67
USE1-207ENST00000596136 KCNJ8Q15842 424 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 C10orf67Q8IYJ2 551 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 FTMTQ8N4E7 242 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 OR1M1Q8NGA1 313 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 OR8J1Q8NGP2 316 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 OR8S1Q8NH09 359 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 IL4I1Q96RQ9 567 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 PKP2Q99959 881 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 PPP1R3EQ9H7J1 279 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 TRIM36Q9NQ86 728 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 C1orf123Q9NWV4 160 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 CLN6Q9NWW5 311 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 USE1Q9NZ43 259 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 WARS2Q9UGM6 360 aaKnown RBP10.89□□□□□ -0.67
USE1-207ENST00000596136 ANK2Q01484 3957 aa10.89□□□□□ -0.67
USE1-207ENST00000596136 TRAV38-1A0A0B4J264 116 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 SAC3D1A6NKF1 404 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 EBAG9O00559 213 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 NDUFA2O43678 99 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 ATP6V1B1P15313 513 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 EPHA1P21709 976 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 HTR1FP30939 366 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 CD80P33681 288 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 PITPNBP48739 271 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 NPY4RP50391 375 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 RIDAP52758 137 aaKnown RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 GNB2P62879 340 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 HOXA4Q00056 320 aaPredicted RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 IL5RAQ01344 420 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 EGR3Q06889 387 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 TMED1Q13445 227 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 TEX36Q5VZQ5 186 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 WDR25Q64LD2 544 aaPredicted RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 ZNF322Q6U7Q0 402 aaPredicted RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 NLRC3Q7RTR2 1065 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 SLC35F2Q8IXU6 374 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 SEMA6DQ8NFY4 1073 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 ZFAND2BQ8WV99 257 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 TRUB1Q8WWH5 349 aaKnown RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 RAB40AQ8WXH6 277 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 OR5P3Q8WZ94 311 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 OR8B2Q96RD0 313 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 PBOV1Q9GZY1 135 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 OR5V1Q9UGF6 321 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 NUFIP1Q9UHK0 495 aaKnown RBP10.88□□□□□ -0.67
USE1-207ENST00000596136 AUP1Q9Y679 476 aa10.88□□□□□ -0.67
USE1-207ENST00000596136 IGHV2-70DA0A0C4DH43 119 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 OOEPA6NGQ2 149 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 PSMD9O00233 223 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 VENTXO95231 258 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 GNALP38405 381 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 MAP2K3P46734 347 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 HILS1P60008 231 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 CXCR4P61073 352 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 POU4F2Q12837 409 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 PRDX4Q13162 271 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 C11orf91Q3C1V1 193 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
USE1-207ENST00000596136 KLF17Q5JT82 389 aaPredicted RBP10.87□□□□□ -0.67
USE1-207ENST00000596136 SLC25A30Q5SVS4 291 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 ZBTB37Q5TC79 503 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 WDR82Q6UXN9 313 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 Q6ZSR3 168 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 FAM90A1Q86YD7 464 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 C19orf18Q8NEA5 215 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 HRASLS5Q96KN8 279 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 MICU1Q9BPX6 476 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 C19orf24Q9BVV8 132 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 PAPOLGQ9BWT3 736 aaKnown RBP10.87□□□□□ -0.67
USE1-207ENST00000596136 RIBC2Q9H4K1 309 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 KAAG1Q9UBP8 84 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 CTSZQ9UBR2 303 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 CLN8Q9UBY8 286 aa10.87□□□□□ -0.67
USE1-207ENST00000596136 ZNF816-ZNF321PA0A0X1KG74 233 aa10.86□□□□□ -0.67
USE1-207ENST00000596136 A6NLC8 198 aa10.86□□□□□ -0.67
USE1-207ENST00000596136 TMEM210A6NLX4 147 aa10.86□□□□□ -0.67
USE1-207ENST00000596136 ANXA2P2A6NMY6 339 aa10.86□□□□□ -0.67
USE1-207ENST00000596136 ZNF850A8MQ14 1090 aa10.86□□□□□ -0.67
USE1-207ENST00000596136 SRRM5B3KS81 715 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms