RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ZNF19P17023 458 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 RAB40BQ12829 278 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 PRDX4Q13162 271 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 IL18R1Q13478 541 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF826PQ6ZT77 177 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 C8orf59Q8N0T1 100 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 CSNK2A3Q8NEV1 391 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 OR8S1Q8NH09 359 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 PIGCQ92535 297 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 TFAP2CQ92754 450 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 TIMD4Q96H15 378 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 C4orf36Q96KX1 117 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 ALG8Q9BVK2 526 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 SLC22A4Q9H015 551 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 MOB1AQ9H8S9 216 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 ISG20L2Q9H9L3 353 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 MRPS18AQ9NVS2 196 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 ERVK13-1Q9NX77 482 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 PCDHGB1Q9Y5G3 927 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 NPTNQ9Y639 398 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 TLN2Q9Y4G6 2542 aa11.61□□□□□ -0.55
SHKBP1-207ENST00000595631 DOCK11Q5JSL3 2073 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 A6NIN4 97 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 TMEM178BH3BS89 294 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 FADS2O95864 444 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 GNALP38405 381 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 GATA4P43694 442 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 MAP2K3P46734 347 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 NANOS3P60323 173 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 GALEQ14376 348 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 ZMYND11Q15326 602 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 CYB5R2Q6BCY4 276 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 C19orf18Q8NEA5 215 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 HPSE2Q8WWQ2 592 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 RAB1CQ92928 201 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 ITPKCQ96DU7 683 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 PELI1Q96FA3 418 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 FGF20Q9NP95 211 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 YAE1D1Q9NRH1 226 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF391Q9UJN7 358 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
SHKBP1-207ENST00000595631 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 ZNF816-ZNF321PA0A0X1KG74 233 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 A6NLC8 198 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 INAFM1C9JVW0 142 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 XPNPEP2O43895 674 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 DHRS3O75911 302 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 PTBP3O95758 552 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 CST4P01036 141 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 LIMS3P0CW19 117 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 LIMS4P0CW20 117 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 THBS2P35442 1172 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 GZMKP49863 264 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 ETV1P50549 477 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 LMO4P61968 165 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 CSNK2BP67870 215 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 SLC3A1Q07837 685 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 KLHL22Q53GT1 634 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 CEP78Q5JTW2 689 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 KLBQ86Z14 1044 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 RDH10Q8IZV5 341 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 CELF2-AS1Q8N7Q2 184 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 PLPP7Q8NBV4 271 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 SEMA6DQ8NFY4 1073 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 OR14K1Q8NGZ2 314 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 OR2G2Q8NGZ5 317 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 FBLIM1Q8WUP2 373 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 GAL3ST1Q99999 423 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 METTL17Q9H7H0 456 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 LPAR2Q9HBW0 351 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 UBAP1Q9NZ09 502 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 NOP16Q9Y3C1 178 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 HSPE1-MOB4S4R3N1 261 aa11.59□□□□□ -0.55
SHKBP1-207ENST00000595631 E9PI62 339 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 IGHV2-5P01817 119 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 HTR1AP08908 422 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 CCL1P22362 96 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 CD80P33681 288 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 BTG1P62324 171 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 ACTA2P62736 377 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 ACTG2P63267 376 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 RIPPLY1Q0D2K3 151 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 RIPK1Q13546 671 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 IZUMO2Q6UXV1 221 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 MOB3CQ70IA8 216 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 THAP5Q7Z6K1 395 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 PEG10Q86TG7 708 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 C11orf53Q8IXP5 236 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 ZDHHC23Q8IYP9 409 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 SPERTQ8NA61 448 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 OR11L1Q8NGX0 322 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 Q8TCH9 128 aa11.58□□□□□ -0.56
SHKBP1-207ENST00000595631 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms