RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 LIPFP07098 398 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 SLC2A5P22732 501 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 POU4F2Q12837 409 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 SNAPC1Q16533 368 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 AWAT1Q58HT5 328 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 TEX36Q5VZQ5 186 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 FAM90A1Q86YD7 464 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 LRRC29Q8WV35 223 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 DNAJC9Q8WXX5 260 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 C1orf147Q96MC9 270 aaPredicted RBP19.5■□□□□ 0.71
LSM4-204ENST00000594828 RASSF4Q9H2L5 321 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 PPP1R3EQ9H7J1 279 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 NIPAL2Q9H841 368 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 TVP23BQ9NYZ1 205 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 KIF17Q9P2E2 1029 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 LAMP5Q9UJQ1 280 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 KLHDC2Q9Y2U9 406 aa19.5■□□□□ 0.71
LSM4-204ENST00000594828 SOX21Q9Y651 276 aaPredicted RBP19.5■□□□□ 0.71
LSM4-204ENST00000594828 ANXA2P2A6NMY6 339 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 HKR1P10072 659 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 EGR1P18146 543 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 CRISP1P54107 249 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 APOFQ13790 326 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 MICU1Q9BPX6 476 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 SMURF1Q9HCE7 757 aa19.49■□□□□ 0.71
LSM4-204ENST00000594828 PAPOLBQ9NRJ5 636 aaKnown RBP19.49■□□□□ 0.71
LSM4-204ENST00000594828 IGHV3OR15-7A0A075B7D8 119 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 ALOX5APP20292 161 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 HCCSP53701 268 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 CSNK2BP67870 215 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 IL5RAQ01344 420 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 FOXL1Q12952 345 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 MICBQ29980 383 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 WDR82Q6UXN9 313 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 KRT77Q7Z794 578 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 GALNT4Q8N4A0 578 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 PNLDC1Q8NA58 520 aaKnown RBP19.48■□□□□ 0.71
LSM4-204ENST00000594828 SLC25A28Q96A46 364 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 ITPKCQ96DU7 683 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 TEAD3Q99594 435 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 PCGF1Q9BSM1 259 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 CADM1Q9BY67 442 aaKnown RBP19.48■□□□□ 0.71
LSM4-204ENST00000594828 MPC1Q9Y5U8 109 aa19.48■□□□□ 0.71
LSM4-204ENST00000594828 ZNF879B4DU55 563 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 CLDN34H7C241 214 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 CDIPTO14735 213 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 TMPRSS2O15393 492 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 MUC1P15941 1255 aaPredicted RBP19.47■□□□□ 0.71
LSM4-204ENST00000594828 DAPP51397 102 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 BPIFB3P59826 476 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 PSMA6P60900 246 aaKnown RBP19.47■□□□□ 0.71
LSM4-204ENST00000594828 GPR157Q5UAW9 335 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 FAHD1Q6P587 224 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 BRD3OSQ6XYD6 125 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 UTP4Q969X6 686 aaKnown RBP19.47■□□□□ 0.71
LSM4-204ENST00000594828 YIPF3Q9GZM5 350 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 KAAG1Q9UBP8 84 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 ZNF391Q9UJN7 358 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 LRP12Q9Y561 859 aa19.47■□□□□ 0.71
LSM4-204ENST00000594828 ZNF850A8MQ14 1090 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 DVL1O14640 695 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 TOX4O94842 621 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 CST4P01036 141 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 RNASE1P07998 156 aaKnown RBP19.46■□□□□ 0.71
LSM4-204ENST00000594828 ACKR3P25106 362 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 CFHR2P36980 270 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 BNIP1Q12981 228 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 PRDX4Q13162 271 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 PTGES3Q15185 160 aaKnown RBP19.46■□□□□ 0.71
LSM4-204ENST00000594828 SLC9A3R2Q15599 337 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 KCTD18Q6PI47 426 aaPredicted RBP19.46■□□□□ 0.71
LSM4-204ENST00000594828 OR8B12Q8NGG6 310 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 OR5K1Q8NHB7 308 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 PIGCQ92535 297 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 LYZL4Q96KX0 146 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 RTL8AQ9BWD3 113 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 TLNRD1Q9H1K6 362 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 ABCB9Q9NP78 766 aa19.46■□□□□ 0.71
LSM4-204ENST00000594828 P2RY10O00398 339 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 ECDO95905 644 aaPredicted RBP19.45■□□□□ 0.7
LSM4-204ENST00000594828 SFTPBP07988 381 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 C11orf91Q3C1V1 193 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 LCN1P1Q5VSP4 162 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 BTN2A1Q7KYR7 527 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 OR5P3Q8WZ94 311 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 ZDHHC16Q969W1 377 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 WDFY2Q96P53 400 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 CCL13Q99616 98 aa19.45■□□□□ 0.7
LSM4-204ENST00000594828 MDFIC2A0A1B0GVS7 189 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 ACOD1A6NK06 481 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 FCN3O75636 299 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 MRPL3P09001 348 aaKnown RBP19.44■□□□□ 0.7
LSM4-204ENST00000594828 ESRRGP62508 458 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 DEFB112Q30KQ8 113 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 METTL11BQ5VVY1 283 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 DEGS2Q6QHC5 323 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 SLC36A1Q7Z2H8 476 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 ST8SIA4Q92187 359 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 RNF170Q96K19 258 aa19.44■□□□□ 0.7
LSM4-204ENST00000594828 TBX15Q96SF7 602 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms