RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FDX2Q6P4F2 183 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 SEMA6DQ8NFY4 1073 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 OR8S1Q8NH09 359 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 Q8TCH9 128 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 PAPOLGQ9BWT3 736 aaKnown RBP21.76■■□□□ 1.07
TRIM28-204ENST00000594806 ERVK13-1Q9NX77 482 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 WIPI2Q9Y4P8 454 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 ZNF816-ZNF321PA0A0X1KG74 233 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 LY6G6DO95868 133 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 ACKR3P25106 362 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 HSPA13P48723 471 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 AQP4P55087 323 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 OR12D2P58182 307 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 Q6ZSR3 168 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 DOK3Q7L591 496 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 LHFPL3Q86UP9 236 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 C1orf87Q8N0U7 546 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 OR11L1Q8NGX0 322 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 PPP1R14AQ96A00 147 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 ACOXLQ9NUZ1 547 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 RHBDD3Q9Y3P4 386 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 NPTNQ9Y639 398 aa21.75■■□□□ 1.07
TRIM28-204ENST00000594806 FSTL3O95633 263 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 CCL1P22362 96 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 CSNK2BP67870 215 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 MED21Q13503 144 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 FAM71F1Q96KD3 344 aaPredicted RBP21.74■■□□□ 1.07
TRIM28-204ENST00000594806 SMR3AQ99954 134 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 MICU1Q9BPX6 476 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 ZNF649Q9BS31 505 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 GSX1Q9H4S2 264 aaPredicted RBP21.74■■□□□ 1.07
TRIM28-204ENST00000594806 FN3KRPQ9HA64 309 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 PLCXD1Q9NUJ7 323 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 TREM2Q9NZC2 230 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 CNOT2Q9NZN8 540 aaKnown RBP21.74■■□□□ 1.07
TRIM28-204ENST00000594806 SLC22A13Q9Y226 551 aa21.74■■□□□ 1.07
TRIM28-204ENST00000594806 TMEM178BH3BS89 294 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 J3QLW9 94 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 CD5LO43866 347 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 RPSAP08865 295 aaKnown RBP21.73■■□□□ 1.07
TRIM28-204ENST00000594806 HTR1AP08908 422 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 PIPP12273 146 aaPredicted RBP21.73■■□□□ 1.07
TRIM28-204ENST00000594806 IRF2P14316 349 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 ZNF12P17014 697 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 ZNF19P17023 458 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 CCR9P51686 369 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 CYB5R2Q6BCY4 276 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 MOGAT3Q86VF5 341 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 OR2G2Q8NGZ5 317 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 C4orf36Q96KX1 117 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 SOX7Q9BT81 388 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 ENPP5Q9UJA9 477 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 DIMT1Q9UNQ2 313 aaKnown RBP21.73■■□□□ 1.07
TRIM28-204ENST00000594806 V9GYS6 101 aa21.73■■□□□ 1.07
TRIM28-204ENST00000594806 A0A1B0GTI1 187 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 A0A1B0GVI7 797 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 EFCAB10A6NFE3 127 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 UBCP0CG48 685 aaKnown RBP21.72■■□□□ 1.07
TRIM28-204ENST00000594806 MVKQ03426 396 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 PRDX4Q13162 271 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 WDR38Q5JTN6 314 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 C6orf52Q5T4I8 152 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 CLDND2Q8NHS1 167 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 PIGCQ92535 297 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 ITPKCQ96DU7 683 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 PELI1Q96FA3 418 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 HIST1H2AAQ96QV6 131 aa21.72■■□□□ 1.07
TRIM28-204ENST00000594806 EXOSC1Q9Y3B2 195 aaKnown RBP21.72■■□□□ 1.07
TRIM28-204ENST00000594806 LOC100289279A0A1B0GTE1 492 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 LRP5LA4QPB2 252 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 ZNF850A8MQ14 1090 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 P2RY10O00398 339 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 MYL12AP19105 171 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 KRTAP1-1Q07627 177 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 AVPI1Q5T686 147 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 TMEM244Q5VVB8 128 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 ZDHHC23Q8IYP9 409 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 PRSS35Q8N3Z0 413 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 ZNF420Q8TAQ5 688 aaPredicted RBP21.71■■□□□ 1.07
TRIM28-204ENST00000594806 RNF166Q96A37 237 aaPredicted RBP21.71■■□□□ 1.07
TRIM28-204ENST00000594806 C1orf159Q96HA4 380 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 TMEM80Q96HE8 168 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 RTL8AQ9BWD3 113 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 CHCHD3Q9NX63 227 aaKnown RBP21.71■■□□□ 1.07
TRIM28-204ENST00000594806 PIGLQ9Y2B2 252 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 CAB39Q9Y376 341 aaPredicted RBP21.71■■□□□ 1.07
TRIM28-204ENST00000594806 TLN2Q9Y4G6 2542 aa21.71■■□□□ 1.07
TRIM28-204ENST00000594806 TMEM210A6NLX4 147 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 SYT7O43581 403 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 IGHV2-70P01814 119 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 ISG15P05161 165 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 LIMS3P0CW19 117 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 LIMS4P0CW20 117 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 IGHV4-31P0DP07 118 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 CPT2P23786 658 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 PSMB10P40306 273 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 CDH15P55291 814 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 BTG1P62324 171 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 TMEM155Q4W5P6 130 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 PRAMEF6Q5VXH4 476 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms