RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CDK5Q00535 292 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 FAHD1Q6P587 224 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 PDZD9Q8IXQ8 264 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 TIGD4Q8IY51 512 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 ST8SIA4Q92187 359 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 RBM4BQ9BQ04 359 aaKnown RBP12.19□□□□□ -0.46
PNKP-202ENST00000593706 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 YY1AP1Q9H869 796 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 A0A0U1RQK1 487 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 H3BN98 237 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 ZNF593O00488 134 aaPredicted RBP12.18□□□□□ -0.46
PNKP-202ENST00000593706 GNGT2O14610 69 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 PLXNB1O43157 2135 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 E2F6O75461 281 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 GRPP07492 148 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 SPARCP09486 303 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 BLVRAP53004 296 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 ARF6P62330 175 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 ZNF92Q03936 586 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 GINS1Q14691 196 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 TAF9Q16594 264 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 DRAM2Q6UX65 266 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 BTN2A1Q7KYR7 527 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 RHOUQ7L0Q8 258 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 OR6K6Q8NGW6 343 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 LRTOMTQ8WZ04 291 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 SLAMF6Q96DU3 332 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 NRBF2Q96F24 287 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 SLC25A19Q9HC21 320 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 TCF7L1Q9HCS4 588 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 MRPL15Q9P015 296 aaKnown RBP12.18□□□□□ -0.46
PNKP-202ENST00000593706 FAM96BQ9Y3D0 163 aa12.18□□□□□ -0.46
PNKP-202ENST00000593706 BTBD17A6NE02 478 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 DVL1O14640 695 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 TIPRLO75663 272 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 GLCEO94923 617 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 PTBP3O95758 552 aaKnown RBP12.17□□□□□ -0.46
PNKP-202ENST00000593706 ECDO95905 644 aaPredicted RBP12.17□□□□□ -0.46
PNKP-202ENST00000593706 ANXA8P13928 327 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 SLC2A5P22732 501 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 GSTT1P30711 240 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 KRTAP10-3P60369 221 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 MZT1Q08AG7 82 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 GLYATL3Q5SZD4 288 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 ASPHD2Q6ICH7 369 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 GDPGP1Q6ZNW5 385 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 ZNF826PQ6ZT77 177 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 PRSS45Q7RTY3 260 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 LDLRAD3Q86YD5 345 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 FAM90A1Q86YD7 464 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 SPERTQ8NA61 448 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 LINC01006Q8NI28 216 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 RNF133Q8WVZ7 376 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
PNKP-202ENST00000593706 AMELYQ99218 206 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 COPS4Q9BT78 406 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 DPAGT1Q9H3H5 408 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 C14orf119Q9NWQ9 140 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 ONECUT1Q9UBC0 465 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 N6AMT1Q9Y5N5 214 aa12.17□□□□□ -0.46
PNKP-202ENST00000593706 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 SLC22A31A6NKX4 558 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 ZNF878C9JN71 531 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 TSPAN15O95858 294 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 POU1F1P28069 291 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 OPRL1P41146 370 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 IER3P46695 156 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 DAPP51397 102 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 TAF13Q15543 124 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 ATP6AP1Q15904 470 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
PNKP-202ENST00000593706 PLBD1Q6P4A8 553 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 VMO1Q7Z5L0 202 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 GCSAMQ8N6F7 178 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 OR8S1Q8NH09 359 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 INTS14Q96SY0 518 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 KCNJ15Q99712 375 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 ABHD6Q9BV23 337 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 OPA3Q9H6K4 179 aa12.16□□□□□ -0.46
PNKP-202ENST00000593706 CAB39Q9Y376 341 aaPredicted RBP12.16□□□□□ -0.46
PNKP-202ENST00000593706 A0A1B0GVI7 797 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 PRODHO43272 600 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 ATP5HO75947 161 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 CLPXO76031 633 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 FBP1P09467 338 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 SLC2A1P11166 492 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 PROK1P58294 105 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 POU4F2Q12837 409 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 CDONQ4KMG0 1287 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 TMEM236Q5W0B7 351 aa12.15□□□□□ -0.46
PNKP-202ENST00000593706 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms