RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 MTRF1O75570 445 aaKnown RBP17.23■□□□□ 0.35
CLIP3-206ENST00000593074 MPIG6BO95866 241 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 HPNP05981 417 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 GSTP1P09211 210 aaKnown RBP17.23■□□□□ 0.35
CLIP3-206ENST00000593074 FAHP16930 419 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 CD82P27701 267 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 SCRN3Q0VDG4 424 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 KISS1Q15726 138 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 FAM189A2Q15884 450 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 SNAI3Q3KNW1 292 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 KRTAP27-1Q3LI81 207 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 RNASE10Q5GAN6 216 aaKnown RBP17.23■□□□□ 0.35
CLIP3-206ENST00000593074 PNLDC1Q8NA58 520 aaKnown RBP17.23■□□□□ 0.35
CLIP3-206ENST00000593074 ZNF845Q96IR2 970 aaPredicted RBP17.23■□□□□ 0.35
CLIP3-206ENST00000593074 PRRT1Q99946 306 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 OR10A2Q9H208 303 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 GHRLQ9UBU3 117 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 DHRS7CA6NNS2 312 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 RFC3P40938 356 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 C4orf46Q504U0 113 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 ATPAF1Q5TC12 328 aaPredicted RBP17.22■□□□□ 0.35
CLIP3-206ENST00000593074 RTN4RL2Q86UN3 420 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 GVQW1Q8N7I0 195 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 ABHD3Q8WU67 409 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 TMEM45BQ96B21 275 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 FOXB1Q99853 325 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 ANAPC10Q9UM13 185 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 KCNK7Q9Y2U2 307 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 CNTRLQ7Z7A1 2325 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 OR6C6A6NF89 314 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 H3BUI4 141 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 OR4E1P0C645 316 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 B4GALT1P15291 398 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 HIST1H1DP16402 221 aaKnown RBP17.22■□□□□ 0.35
CLIP3-206ENST00000593074 TBPP20226 339 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 ZNF81P51508 661 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 H2BFSP57053 126 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 UBE2V2Q15819 145 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 C2orf68Q2NKX9 166 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 PLAC9Q5JTB6 97 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 TEX261Q6UWH6 196 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 FTMTQ8N4E7 242 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 OR1F12Q8NHA8 337 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 IFT46Q9NQC8 304 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 OPN4Q9UHM6 478 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 PIGLQ9Y2B2 252 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 U3KQ87 197 aa17.22■□□□□ 0.35
CLIP3-206ENST00000593074 NAT2P11245 290 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 PTGFRP43088 359 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 LHX2P50458 406 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 TSPAN5P62079 268 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 TGIF1Q15583 401 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 MPPED2Q15777 294 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 SLC22A6Q4U2R8 563 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 ZNF774Q6NX45 483 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 OR8H1Q8NGG4 311 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 TNFAIP8L1Q8WVP5 186 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 RAB3CQ96E17 227 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 TMPRSS13Q9BYE2 586 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 BANF2Q9H503 90 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 GPR35Q9HC97 309 aa17.21■□□□□ 0.35
CLIP3-206ENST00000593074 IGKV3D-15A0A087WSY6 115 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 A0A1W2PP11 408 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 ERVH48-1M5A8F1 160 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 SOCS1O15524 211 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 CRTAPO75718 401 aaPredicted RBP17.2■□□□□ 0.34
CLIP3-206ENST00000593074 ZNF32P17041 273 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 HGFACQ04756 655 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 CEACAM16Q2WEN9 425 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 SFRP5Q5T4F7 317 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 OR52W1Q6IF63 320 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 OR56B1Q8NGI3 324 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 SGK3Q96BR1 496 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 URM1Q9BTM9 101 aaKnown RBP17.2■□□□□ 0.34
CLIP3-206ENST00000593074 TTTY12Q9BZ98 90 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 CST11Q9H112 138 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 PLEKHA6Q9Y2H5 1048 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 PLSCR5A0PG75 271 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 PRR33A8MZF0 331 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 SP1P08047 785 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 CELA3AP09093 270 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 TMEM50BP56557 158 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 GNG2P59768 71 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 UBE2MP61081 183 aaKnown RBP17.2■□□□□ 0.34
CLIP3-206ENST00000593074 RPS27AP62979 156 aaKnown RBP17.2■□□□□ 0.34
CLIP3-206ENST00000593074 PLGLB1Q02325 96 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 SCGB2B2Q4G0G5 96 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 FAM89BQ8N5H3 189 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 UXS1Q8NBZ7 420 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 ASB13Q8WXK3 278 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 HAS2Q92819 552 aa17.2■□□□□ 0.34
CLIP3-206ENST00000593074 KLF13Q9Y2Y9 288 aaPredicted RBP17.2■□□□□ 0.34
CLIP3-206ENST00000593074 FAM166BA8MTA8 275 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 CDRT15L2A8MXV6 281 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 MFNGO00587 321 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 NAT1P18440 290 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 HRH1P35367 487 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 CLDN18P56856 261 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 NKPD1Q17RQ9 610 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 PNLIPRP3Q17RR3 467 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms