RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SPTSSAQ969W0 71 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 TMIGD2Q96BF3 282 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 NRBF2Q96F24 287 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 CENPNQ96H22 339 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-207ENST00000591519 OR51V1Q9H2C8 321 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 CMC2Q9NRP2 79 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 TVP23BQ9NYZ1 205 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 MRPL15Q9P015 296 aaKnown RBP8.64□□□□□ -1.03
VPS4B-207ENST00000591519 RNF7Q9UBF6 113 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 OAZ3Q9UMX2 235 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 IGHV3OR16-10A0A075B7F0 116 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 TRAV40A0A0B4J280 105 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 SRRM5B3KS81 715 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 C22orf46C9J442 243 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 PRR23D1E9PI22 279 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-207ENST00000591519 H3BNX3 289 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 M0R135 149 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 LGALS8O00214 317 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 KCNAB3O43448 404 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 ENSAO43768 121 aaKnown RBP8.63□□□□□ -1.03
VPS4B-207ENST00000591519 BAG2O95816 211 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 LHBP01229 141 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 PRR23D2P0DMB1 279 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-207ENST00000591519 PSKH1P11801 424 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 MMP9P14780 707 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 CA6P23280 308 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 CRISP1P54107 249 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 FGF12P61328 243 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 RPS7P62081 194 aaKnown RBP8.63□□□□□ -1.03
VPS4B-207ENST00000591519 CDK5Q00535 292 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF92Q03936 586 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 OR8G1Q15617 311 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 TEX30Q5JUR7 227 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 GPR157Q5UAW9 335 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 PRAMEF6Q5VXH4 476 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 MRPL21Q7Z2W9 205 aaKnown RBP8.63□□□□□ -1.03
VPS4B-207ENST00000591519 TMEM86BQ8N661 226 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 BBS1Q8NFJ9 593 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF799Q96GE5 643 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 FAM71F1Q96KD3 344 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-207ENST00000591519 TEX12Q9BXU0 123 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 RIBC2Q9H4K1 309 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 FN3KRPQ9HA64 309 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 TRIM36Q9NQ86 728 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 ERVK-18Q9QC07 812 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 CTSZQ9UBR2 303 aa8.63□□□□□ -1.03
VPS4B-207ENST00000591519 TRAV38-1A0A0B4J264 116 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 MDFIC2A0A1B0GVS7 189 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF879B4DU55 563 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 P2RY10O00398 339 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF593O00488 134 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-207ENST00000591519 HOXA3O43365 443 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-207ENST00000591519 HMGN1P05114 100 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 MDKP21741 143 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-207ENST00000591519 PAICSP22234 425 aaKnown RBP8.62□□□□□ -1.03
VPS4B-207ENST00000591519 EPHA2P29317 976 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 FMO3P31513 532 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 CFHR2P36980 270 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 DDOSTP39656 456 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 SLC25A1P53007 311 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 PTGES3Q15185 160 aaKnown RBP8.62□□□□□ -1.03
VPS4B-207ENST00000591519 SNAPC1Q16533 368 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 SNAI3Q3KNW1 292 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 ZFP1Q6P2D0 407 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 BRD3OSQ6XYD6 125 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 ERI1Q8IV48 349 aaKnown RBP8.62□□□□□ -1.03
VPS4B-207ENST00000591519 CPOQ8IVL8 374 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 C19orf18Q8NEA5 215 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 SPSB4Q96A44 273 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 DMRTB1Q96MA1 342 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 CIB1Q99828 191 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 NMNAT2Q9BZQ4 307 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 GABARAPL1Q9H0R8 117 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 S100A14Q9HCY8 104 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 CENPMQ9NSP4 180 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 UFSP2Q9NUQ7 469 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 KAAG1Q9UBP8 84 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 COMMD3-BMI1R4GMX3 469 aa8.62□□□□□ -1.03
VPS4B-207ENST00000591519 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 C5orf63A6NC05 138 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 OOEPA6NGQ2 149 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 ERICH4A6NGS2 130 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 GGT3PA6NGU5 568 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 EI24O14681 340 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 SELENOFO60613 162 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 NDUFA7O95182 113 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 ECDO95905 644 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 GSTT1P30711 240 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 POLR2IP36954 125 aaKnown RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 NAA10P41227 235 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 ENTPD1P49961 510 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 RPL15P61313 204 aaKnown RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 MZT1Q08AG7 82 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 EIF2B1Q14232 305 aaKnown RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 TAF13Q15543 124 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 ZIK1Q3SY52 487 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 GLYATL3Q5SZD4 288 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 TEX36Q5VZQ5 186 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 KDM4DQ6B0I6 523 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms