RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DNASE1L1P49184 302 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 CYCSP99999 105 aaKnown RBP13.5□□□□□ -0.25
CIRBP-228ENST00000590347 PRAMEF8Q5VWM4 474 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 PRAMEF7Q5VXH5 474 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 ADGRE4PQ86SQ3 457 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 MAML2Q8IZL2 1156 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-228ENST00000590347 CDCA3Q99618 268 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-228ENST00000590347 FAAP24Q9BTP7 215 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 DPEP2Q9H4A9 486 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 BANF2Q9H503 90 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 CYP8B1Q9UNU6 501 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 NOTCH4Q99466 2003 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 WDFY3Q8IZQ1 3526 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 ARHGAP21Q5T5U3 1957 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 ZNF888P0CJ79 500 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-228ENST00000590347 OR5H8P0DN80 308 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 THBS4P35443 961 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 BPIFB3P59826 476 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 SLC35A1P78382 337 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 SLC16A9Q7RTY1 509 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 SLC22A18Q96BI1 424 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 F5P12259 2224 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 OTOL1A6NHN0 477 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-228ENST00000590347 MKRN2OSH3BPM6 223 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM128Q5BJH2 165 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 ZNF429Q86V71 674 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM123Q8N131 208 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 CCDC74BQ96LY2 380 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 GPR87Q9BY21 358 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
CIRBP-228ENST00000590347 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 K7EQS6 105 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 WNT5AP41221 380 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 TDGF1P3P51864 188 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 P2RY6Q15077 328 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 ZNF658BQ4V348 819 aaPredicted RBP13.49□□□□□ -0.25
CIRBP-228ENST00000590347 AMZ2Q86W34 360 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 SLC35G3Q8N808 338 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 MKKSQ9NPJ1 570 aaPredicted RBP13.49□□□□□ -0.25
CIRBP-228ENST00000590347 LUZP4Q9P127 313 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 GAB2Q9UQC2 676 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 HS3ST2Q9Y278 367 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM212A6NML5 194 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 DHRS7CA6NNS2 312 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 MPZL1O95297 269 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 CT62P0C5K7 136 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 SLC2A1P11166 492 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 HNRNPKP61978 463 aaKnown RBP eCLIP13.49□□□□□ -0.258e-8■□□□□ 10.2
CIRBP-228ENST00000590347 ZP2Q05996 745 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 PRSS41Q7RTY9 318 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 C2orf50Q96LR7 162 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 IGFLR1Q9H665 355 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 Q9N2J8 555 aa13.49□□□□□ -0.25
CIRBP-228ENST00000590347 MYOZ1Q9NP98 299 aaPredicted RBP13.49□□□□□ -0.25
CIRBP-228ENST00000590347 CD55P08174 381 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 WASP42768 502 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 GPR18Q14330 331 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 JOSD1Q15040 202 aaPredicted RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 ITPRIPL2Q3MIP1 535 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 ZNF260Q3ZCT1 412 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 ZDHHC22Q8N966 263 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 POC1AQ8NBT0 407 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 OR13C3Q8NGS6 347 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 OR2A1Q8NGT9 310 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 LCN9Q8WX39 176 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 KLHDC3Q9BQ90 382 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 WNT5BQ9H1J7 359 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 CNTD2Q9H8S5 307 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 SLC17A5Q9NRA2 495 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 PLXNA2O75051 1894 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 C17orf51A8MQB3 221 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 M0R143 59 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 SCGB1D1O95968 90 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 MMP16P51512 607 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 UCP3P55916 312 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 LBHQ53QV2 105 aaPredicted RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 RCBTB1Q8NDN9 531 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 ASB5Q8WWX0 329 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 RSPRY1Q96DX4 576 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 PELI2Q9HAT8 420 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 EMC9Q9Y3B6 208 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 A0A1B0GUS0 222 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 SFT2D2O95562 160 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 APOBEC1P41238 236 aaKnown RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 ACAA2P42765 397 aaKnown RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 EIF5AP63241 154 aaKnown RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 UNC119Q13432 240 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 COTL1Q14019 142 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 TERB2Q8NHR7 220 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 RPS4Y2Q8TD47 263 aa13.48□□□□□ -0.25
CIRBP-228ENST00000590347 MRPL24Q96A35 216 aaKnown RBP13.48□□□□□ -0.25
CIRBP-228ENST00000590347 FOXD3Q9UJU5 478 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms