RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CHST5Q9GZS9 411 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 CST11Q9H112 138 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 TP63Q9H3D4 680 aaPredicted RBP9.86□□□□□ -0.83
LIG3-204ENST00000585740 RANBP3Q9H6Z4 567 aaPredicted RBP9.86□□□□□ -0.83
LIG3-204ENST00000585740 GP6Q9HCN6 339 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 NKIRAS2Q9NYR9 191 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ING4Q9UNL4 249 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 TRGV5A0A0B4J1U4 118 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 A6NL46 340 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 RAB27BO00194 218 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 ARPC1BO15143 372 aaKnown RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 XRCC2O43543 280 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 SSNA1O43805 119 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 CELA3AP09093 270 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 GSTP1P09211 210 aaKnown RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 SULT1A3P0DMM9 295 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 SULT1A4P0DMN0 295 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 CPN1P15169 458 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 B4GALT1P15291 398 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 TBPP20226 339 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 PRKACBP22694 351 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 RFC3P40938 356 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 GZMKP49863 264 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 NKX2-5P52952 324 aaPredicted RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 GUCA2AQ02747 115 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 RIPPLY1Q0D2K3 151 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 UNC119Q13432 240 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 CNN3Q15417 329 aaKnown RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 PNLIPRP3Q17RR3 467 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 OR10K2Q6IF99 312 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 ZNF774Q6NX45 483 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 GLDNQ6ZMI3 551 aaPredicted RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 Q6ZTK2 550 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 ZNF584Q8IVC4 421 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 ZNF100Q8IYN0 542 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 GABRG1Q8N1C3 465 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 PAQR4Q8N4S7 273 aaPredicted RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 CHST4Q8NCG5 386 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 OR56B1Q8NGI3 324 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 CAPSLQ8WWF8 208 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 SPSB1Q96BD6 273 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 RNF170Q96K19 258 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 HYLS1Q96M11 299 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 TECTBQ96PL2 329 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 SLC25A21Q9BQT8 299 aaPredicted RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 WNT5BQ9H1J7 359 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 OR10A4Q9H209 315 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 LDAHQ9H6V9 325 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 ZNF552Q9H707 407 aaPredicted RBP9.85□□□□□ -0.83
LIG3-204ENST00000585740 PIGLQ9Y2B2 252 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 ZNF175Q9Y473 711 aa9.85□□□□□ -0.83
LIG3-204ENST00000585740 ZNF891A8MT65 544 aaPredicted RBP9.84□□□□□ -0.83
LIG3-204ENST00000585740 DISC1C4P0D8 188 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 RGS13O14921 159 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CREBL2O60519 120 aaPredicted RBP9.84□□□□□ -0.83
LIG3-204ENST00000585740 CDC14BO60729 498 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 RAB3DO95716 219 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 LCATP04180 440 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CD74P04233 296 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 FCGR2AP12318 317 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CBX5P45973 191 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 PSG4Q00888 419 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 FAPQ12884 760 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 TNK1Q13470 666 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CDK10Q15131 360 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 NDUFA5Q16718 116 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CDNFQ49AH0 187 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 TMEM255AQ5JRV8 349 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 ZBTB37Q5TC79 503 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 TSPO2Q5TGU0 170 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 TMEM53Q6P2H8 277 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 NAA40Q86UY6 237 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 SKA3Q8IX90 412 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 TUSC5Q8IXB3 177 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 ACBD4Q8NC06 268 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 STEAP2Q8NFT2 490 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CCDC107Q8WV48 283 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 APH1AQ96BI3 265 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 SGK3Q96BR1 496 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 REEP6Q96HR9 211 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 S100A13Q99584 98 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 GINS4Q9BRT9 223 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 SOX7Q9BT81 388 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 TMEM59Q9BXS4 323 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 BEX2Q9BXY8 128 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 PRDM14Q9GZV8 571 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 LPAR5Q9H1C0 372 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 SLA2Q9H6Q3 261 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 ZDHHC11Q9H8X9 412 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 CALHM2Q9HA72 323 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 SCP2D1Q9UJQ7 156 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 ZNF222Q9UK12 451 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 ARHGAP21Q5T5U3 1957 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 MAST4O15021 2626 aa9.84□□□□□ -0.83
LIG3-204ENST00000585740 DNAJC13O75165 2243 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 MEIKINA0A087WXM9 373 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms