RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PURGQ9UJV8 347 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OPN1LWP04000 364 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CD79AP11912 226 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SMAD4Q13485 552 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SMAD2Q15796 467 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 KCNMB1Q16558 191 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 NKAIN1Q4KMZ8 207 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR5L2Q8NGL0 311 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 WIF1Q9Y5W5 379 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 B3GALT1Q9Y5Z6 326 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 A0A1W2PNR3 127 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZNF814B7Z6K7 855 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CRTAPO75718 401 aaPredicted RBP12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 LYL1P12980 280 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 FPR2P25090 351 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SUPT4H1P63272 117 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 HIST3H3Q16695 136 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CCDC157Q569K6 752 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CARD17Q5XLA6 110 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 DOK3Q7L591 496 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR10G3Q8NGC4 313 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR10Z1Q8NGY1 313 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CYYR1Q96J86 154 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SCGB3A2Q96PL1 93 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RTBDNQ9BSG5 229 aaPredicted RBP12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 URM1Q9BTM9 101 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.4
CDK5RAP3-237ENST00000585163 IGKV1-9A0A0C4DH69 117 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ADAP1O75689 374 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 BPIFB3P59826 476 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SVBPQ8N300 66 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FAM89BQ8N5H3 189 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR5H2Q8NGV7 314 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PAQR8Q8TEZ7 354 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OXGR1Q96P68 337 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GPER1Q99527 375 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 METTL7AQ9H8H3 244 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MYOTQ9UBF9 498 aa12.52□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GPR31O00270 319 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NDUFA2O43678 99 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ACTL6AO96019 429 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 QDPRP09417 244 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AKR1C2P52895 323 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AKR1C1Q04828 323 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NKAPLQ5M9Q1 402 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FAM69BQ5VUD6 431 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FAM57BQ71RH2 274 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NUDT19A8MXV4 375 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SIGLEC6O43699 453 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TIAF1O95411 115 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PI3P19957 117 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ARFRP1Q13795 201 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ANKRD55Q3KP44 614 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR14K1Q8NGZ2 314 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR13G1Q8NGZ3 307 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR10A2Q9H208 303 aa12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TOX3O15405 576 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 RAMP1O60894 148 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR2J2O76002 312 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FAM157CP0CG43 387 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF43P17038 809 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AMY2BP19961 511 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GRB2P62993 217 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF239Q16600 458 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GFOD2Q3B7J2 385 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 C10orf91Q5T1B1 145 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 Q7L0L9 218 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF283Q8N7M2 679 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR2M3Q8NG83 312 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CA14Q9ULX7 337 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OSGIN2Q9Y236 505 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CEP192Q8TEP8 1941 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FOXI3A8MTJ6 420 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 E9PLN8 166 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZFAND5O76080 213 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ALDH3B1P43353 468 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC6A9P48067 706 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GUCA2BQ16661 112 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms