RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ALOX5APP20292 161 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 SLC2A5P22732 501 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 CD80P33681 288 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 PAX8Q06710 450 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 CD276Q5ZPR3 534 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 WDR25Q64LD2 544 aaPredicted RBP10.34□□□□□ -0.75
SS18-225ENST00000585121 SFRP4Q6FHJ7 346 aaPredicted RBP10.34□□□□□ -0.75
SS18-225ENST00000585121 DEGS2Q6QHC5 323 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 PRSS45Q7RTY3 260 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 C19orf18Q8NEA5 215 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 SEMA6DQ8NFY4 1073 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 ASB17Q8WXJ9 295 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 HIST1H2AAQ96QV6 131 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 SLC6A7Q99884 636 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 NUDT16L1Q9BRJ7 211 aaKnown RBP10.34□□□□□ -0.75
SS18-225ENST00000585121 MROQ9BYG7 248 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 ZNF254O75437 659 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 BAG2O95816 211 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 FSHBP01225 129 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 MRPL3P09001 348 aaKnown RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 ACTG1P63261 375 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 LYPD2Q6UXB3 125 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 MEPCEQ7L2J0 689 aaKnown RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 AMIGO2Q86SJ2 522 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 FAM81AQ8TBF8 368 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 C22orf15Q8WYQ4 148 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ITFG2Q969R8 447 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 TECTBQ96PL2 329 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 CNN2Q99439 309 aaKnown RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 RTL8AQ9BWD3 113 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 MS4A7Q9GZW8 240 aaPredicted RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 RHBDD3Q9Y3P4 386 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 LRP12Q9Y561 859 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ARHGAP32A7KAX9 2087 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 KIR2DS1A0A191URI9 304 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 TMEM269A0A1B0GVZ9 245 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 SLC22A31A6NKX4 558 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 HAX1O00165 279 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ADAM20O43506 726 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 PRKYO43930 277 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 PSMB10P40306 273 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 RIDAP52758 137 aaKnown RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 HCCSP53701 268 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 MICBQ29980 383 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ZNF829Q3KNS6 432 aaPredicted RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 KDM4DQ6B0I6 523 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 C12orf54Q6X4T0 127 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ZNF826PQ6ZT77 177 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 KCTD8Q6ZWB6 473 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 COMMD2Q86X83 199 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 GID4Q8IVV7 300 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 PQLC1Q8N2U9 271 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 GALNT4Q8N4A0 578 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
SS18-225ENST00000585121 TCEANCQ8N8B7 351 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 OR1M1Q8NGA1 313 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 TMEM163Q8TC26 289 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 LRRC29Q8WV35 223 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 LRTOMTQ8WZ04 291 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 MNTQ99583 582 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 GABARAPL1Q9H0R8 117 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 IKZF2Q9UKS7 526 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 KLHDC2Q9Y2U9 406 aa10.33□□□□□ -0.76
SS18-225ENST00000585121 CCDC182A6NF36 153 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 TMEM210A6NLX4 147 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 ZAR1LA6NP61 321 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 ZNF850A8MQ14 1090 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 CASQ2O14958 399 aaPredicted RBP10.32□□□□□ -0.76
SS18-225ENST00000585121 MITFO75030 526 aaPredicted RBP10.32□□□□□ -0.76
SS18-225ENST00000585121 GYPAP02724 150 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 LIPFP07098 398 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 DCTDP32321 178 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 MAP2K3P46734 347 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 MTNR1AP48039 350 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 PAX2Q02962 417 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 PRDX4Q13162 271 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 SLX4IPQ5VYV7 408 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 NXNL2Q5VZ03 156 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 ZNF679Q8IYX0 411 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 GCSAMQ8N6F7 178 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 OR8B12Q8NGG6 310 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 PIGCQ92535 297 aa10.32□□□□□ -0.76
SS18-225ENST00000585121 CENPNQ96H22 339 aaPredicted RBP10.32□□□□□ -0.76
SS18-225ENST00000585121 A0A0U1RQV5 110 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ZNF670-ZNF695F2Z2N8 137 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 PSMD9O00233 223 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 CST4P01036 141 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 LHBP01229 141 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ATP6V1B1P15313 513 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 MUC1P15941 1255 aaPredicted RBP10.31□□□□□ -0.76
SS18-225ENST00000585121 VHLP40337 213 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ROM1Q03395 351 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 TEX36Q5VZQ5 186 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ZNF841Q6ZN19 808 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms