RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ALPL	P05186	524 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	GRP	P07492	148 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ADRA2C	P18825	462 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	PAX2	Q02962	417 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	MFGE8	Q08431	387 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	MZT1	Q08AG7	82 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF154	Q13106	437 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	DCDC5	Q6ZRR9	648 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF826P	Q6ZT77	177 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF679	Q8IYX0	411 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	C19orf18	Q8NEA5	215 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8S1	Q8NH09	359 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ASB17	Q8WXJ9	295 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	DACT3	Q96B18	629 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ITPKC	Q96DU7	683 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	NEIL1	Q96FI4	390 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	PAPOLG	Q9BWT3	736 aa	Known RBP	11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	MRO	Q9BYG7	248 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	C7orf69	Q9H7B7	122 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	C14orf119	Q9NWQ9	140 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	USE1	Q9NZ43	259 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	MIOX	Q9UGB7	285 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	RHBDD3	Q9Y3P4	386 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	INSIG2	Q9Y5U4	225 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760		A0A0U1RQV5	110 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	TMEM269	A0A1B0GVZ9	245 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	ACOD1	A6NK06	481 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760		A6NLC8	198 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	LGALS8	O00214	317 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	EI24	O14681	340 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	SRSF10	O75494	262 aa	Known RBP	11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	CST4	P01036	141 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	EPHA1	P21709	976 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	CD80	P33681	288 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	PSMB10	P40306	273 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	COMP	P49747	757 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	CXCR4	P61073	352 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	CSNK2B	P67870	215 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	SNCB	Q16143	134 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	LYPD2	Q6UXB3	125 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	NLRC3	Q7RTR2	1065 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	C11orf53	Q8IXP5	236 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	SLC35F2	Q8IXU6	374 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	FTMT	Q8N4E7	242 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	GCSAM	Q8N6F7	178 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8J1	Q8NGP2	316 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	HPSE2	Q8WWQ2	592 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	MNT	Q99583	582 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	FGF23	Q9GZV9	251 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	TLNRD1	Q9H1K6	362 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	C1orf123	Q9NWV4	160 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	CLN6	Q9NWW5	311 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR5V1	Q9UGF6	321 aa		11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	NUFIP1	Q9UHK0	495 aa	Known RBP	11.1	□□□□□ -0.63
SREBF1-223	ENST00000584760	hCG_1807616	A0A1W2PRN6	198 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	TMEM89	A2RUT3	159 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	OOEP	A6NGQ2	149 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760		E9PQ18	207 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	PHYH	O14832	338 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	LHB	P01229	141 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	HTR1F	P30939	366 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	GNAL	P38405	381 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	PITPNB	P48739	271 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	RIDA	P52758	137 aa	Known RBP	11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	GNB2	P62879	340 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	EGR3	Q06889	387 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	PRDX4	Q13162	271 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	SCGB2A2	Q13296	93 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	WDR82	Q6UXN9	313 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF841	Q6ZN19	808 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	KRT74	Q7RTS7	529 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	SSX6	Q7RTT6	188 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	GALNT4	Q8N4A0	578 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR1M1	Q8NGA1	313 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8B3	Q8NGG8	313 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR51G2	Q8NGK0	314 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	NANP	Q8TBE9	248 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF418	Q8TF45	676 aa	Predicted RBP	11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8B2	Q96RD0	313 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	PBOV1	Q9GZY1	135 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	ABCB9	Q9NP78	766 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	CTSZ	Q9UBR2	303 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	WARS2	Q9UGM6	360 aa	Known RBP	11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	IKZF2	Q9UKS7	526 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	MPC1	Q9Y5U8	109 aa		11.09	□□□□□ -0.63
SREBF1-223	ENST00000584760	TRAV38-1	A0A0B4J264	116 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	IGHV2-70D	A0A0C4DH43	119 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	ANXA2P2	A6NMY6	339 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZNF850	A8MQ14	1090 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	C3orf80	F5H4A9	247 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	TNFRSF13B	O14836	293 aa	Predicted RBP	11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	MAGEB4	O15481	346 aa	Predicted RBP	11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	TTR	P02766	147 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	ALDH3A2	P51648	485 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	IL5RA	Q01344	420 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms