RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 OR10AD1Q8NGE0 317 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 HRASLSQ9HDD0 168 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 TRGV5A0A0B4J1U4 118 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 A0A1B0GV50 99 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 HGFACQ04756 655 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 RIN1Q13671 783 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 OR1M1Q8NGA1 313 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 M1APQ8TC57 530 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 ARHGAP5-AS1Q96IT6 56 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 SEMA5BQ9P283 1151 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 MGAT4AQ9UM21 535 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 HDGFL3Q9Y3E1 203 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 HIVEP3Q5T1R4 2406 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 ZNF587BE7ETH6 402 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 ATXN7O15265 892 aaPredicted RBP9.01□□□□□ -0.97
RFFL-212ENST00000584655 ACKR3P25106 362 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 OR3A3P47888 321 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 OR3A2P47893 321 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 GPM6AP51674 278 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 PIGYQ3MUY2 71 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 SMUG1Q53HV7 270 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 EMC4Q5J8M3 183 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 PXDC1Q5TGL8 231 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 ZNF584Q8IVC4 421 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 CARFQ8N187 725 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 ZIC4Q8N9L1 334 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 APH1AQ96BI3 265 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 REEP6Q96HR9 211 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 ST6GAL2Q96JF0 529 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 FER1L6-AS2Q96M78 137 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 NIPAL2Q9H841 368 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 FOXJ3Q9UPW0 622 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 TM4SF5O14894 197 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 CTAG2O75638 210 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 SCGB1D2O95969 90 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 SP1P08047 785 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 FAM87AP0C7U9 286 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 HOXA6P31267 233 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 PSG4Q00888 419 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 TCF15Q12870 199 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 MAB21L1Q13394 359 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 RSU1Q15404 277 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 TMEM244Q5VVB8 128 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 SLC25A26Q70HW3 274 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 CCDC28AQ8IWP9 274 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 GJC3Q8NFK1 279 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 CHRNA10Q9GZZ6 450 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 ZNF442Q9H7R0 627 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 G6PC2Q9NQR9 355 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 RBM7Q9Y580 266 aaKnown RBP9.01□□□□□ -0.97
RFFL-212ENST00000584655 B4E171 279 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 GOSR2O14653 212 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 TSPAN9O75954 239 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 HPP00738 406 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 HRH1P35367 487 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 TSPAN7P41732 249 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 SEC61A1P61619 476 aaKnown RBP9.01□□□□□ -0.97
RFFL-212ENST00000584655 ZNF92Q03936 586 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 UBE2NLQ5JXB2 153 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 FJX1Q86VR8 437 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 CATSPERDQ86XM0 798 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 SNIP1Q8TAD8 396 aaKnown RBP9.01□□□□□ -0.97
RFFL-212ENST00000584655 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
RFFL-212ENST00000584655 GPX7Q96SL4 187 aaPredicted RBP9.01□□□□□ -0.97
RFFL-212ENST00000584655 FAAP24Q9BTP7 215 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 PLEKHJ1Q9NW61 149 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 GPR160Q9UJ42 338 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 KLK13Q9UKR3 277 aa9.01□□□□□ -0.97
RFFL-212ENST00000584655 C5orf51A6NDU8 294 aa9□□□□□ -0.97
RFFL-212ENST00000584655 BET1O15155 118 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ARPC5O15511 151 aa9□□□□□ -0.97
RFFL-212ENST00000584655 UBL3O95164 117 aa9□□□□□ -0.97
RFFL-212ENST00000584655 RRASP10301 218 aa9□□□□□ -0.97
RFFL-212ENST00000584655 RAC3P60763 192 aa9□□□□□ -0.97
RFFL-212ENST00000584655 EGR3Q06889 387 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ST3GAL2Q16842 350 aa9□□□□□ -0.97
RFFL-212ENST00000584655 BORCS8Q96FH0 119 aa9□□□□□ -0.97
RFFL-212ENST00000584655 FAM173AQ9BQD7 235 aa9□□□□□ -0.97
RFFL-212ENST00000584655 POTEKPQ9BYX7 375 aa9□□□□□ -0.97
RFFL-212ENST00000584655 NXF2Q9GZY0 626 aaKnown RBP9□□□□□ -0.97
RFFL-212ENST00000584655 OR51J1Q9H342 316 aa9□□□□□ -0.97
RFFL-212ENST00000584655 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ZNF503-AS2A6NEH8 195 aa9□□□□□ -0.97
RFFL-212ENST00000584655 LILRA1O75019 489 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ZNF16P17020 682 aaPredicted RBP9□□□□□ -0.97
RFFL-212ENST00000584655 SRD5A2P31213 254 aa9□□□□□ -0.97
RFFL-212ENST00000584655 CCR9P51686 369 aa9□□□□□ -0.97
RFFL-212ENST00000584655 PSMA6P60900 246 aaKnown RBP9□□□□□ -0.97
RFFL-212ENST00000584655 SP6Q3SY56 376 aa9□□□□□ -0.97
RFFL-212ENST00000584655 TPRA1Q86W33 373 aa9□□□□□ -0.97
RFFL-212ENST00000584655 OR56B2PQ8NGI1 322 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ZBTB8AQ96BR9 441 aa9□□□□□ -0.97
RFFL-212ENST00000584655 TMEM59Q9BXS4 323 aa9□□□□□ -0.97
RFFL-212ENST00000584655 SLC26A1Q9H2B4 701 aa9□□□□□ -0.97
RFFL-212ENST00000584655 CRIM1Q9NZV1 1036 aa9□□□□□ -0.97
RFFL-212ENST00000584655 FBXO9Q9UK97 447 aaPredicted RBP9□□□□□ -0.97
RFFL-212ENST00000584655 USP9XQ93008 2570 aaPredicted RBP9□□□□□ -0.97
RFFL-212ENST00000584655 SLC22A20A6NK97 555 aa9□□□□□ -0.97
RFFL-212ENST00000584655 KLRC4-KLRK1H3BQV0 150 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms