RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 SCCPDHQ8NBX0 429 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 GJC3Q8NFK1 279 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 FAM110DQ8TAY7 271 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 TBC1D15Q8TC07 691 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 SLC7A13Q8TCU3 470 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 ERGIC1Q969X5 290 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 SLCO4A1Q96BD0 722 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 GPX7Q96SL4 187 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 SIKE1Q9BRV8 207 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 SIRPDQ9H106 197 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 KRT84Q9NSB2 600 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 CMTM6Q9NX76 183 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 ERVK-18Q9QC07 812 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 MAGEL2Q9UJ55 1249 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 TMEM5Q9Y2B1 443 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 IGLV1-36A0A0B4J1U3 117 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A1B0GW55 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 LGALS8O00214 317 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 CXCR6O00574 342 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 OR10H3O60404 316 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 PPP1R3DO95685 299 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 TXNDC12O95881 172 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 SERPINA1P01009 418 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 NPPAP01160 153 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 GYPAP02724 150 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 LCATP04180 440 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 CSF1P09603 554 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L2P0CJ85 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L3P0CJ86 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L4P0CJ87 422 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L5P0CJ88 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L6P0CJ89 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L7P0CJ90 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 CA6P23280 308 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 IER3P46695 156 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 OMPP47874 163 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 RPS6KA3P51812 740 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 ARF6P62330 175 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 CD83Q01151 205 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 TRAP1Q12931 704 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 MAPRE2Q15555 327 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 OR8G1Q15617 311 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 BAK1Q16611 211 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 FGD3Q5JSP0 725 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 SLC18B1Q6NT16 456 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DNM1P34Q6PK57 102 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4L9Q6RFH8 374 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 PGAP1Q75T13 922 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 MRPL21Q7Z2W9 205 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 TSEN54Q7Z6J9 526 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 LDLRAD3Q86YD5 345 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 FGFRL1Q8N441 504 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 PNLDC1Q8NA58 520 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 SPRYD4Q8WW59 207 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 RCN3Q96D15 328 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 PITX2Q99697 317 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 ATF6BQ99941 703 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 ADAT1Q9BUB4 502 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 TRIM15Q9C019 465 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 SEMA6AQ9H2E6 1030 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 FN3KQ9H479 309 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 FN3KRPQ9HA64 309 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 PNRC2Q9NPJ4 139 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 SAR1AQ9NR31 198 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 TMEM140Q9NV12 185 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 MRGBPQ9NV56 204 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 GID8Q9NWU2 228 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 RNF7Q9UBF6 113 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 DUX4Q9UBX2 424 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 B9D1Q9UPM9 204 aa6.42□□□□□ -1.38
SMCHD1-210ENST00000583800 IGHV3OR15-7A0A075B7D8 119 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 TRAV38-1A0A0B4J264 116 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 TRBV4-1A0A0J9YWV2 114 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 C5orf63A6NC05 138 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 OOEPA6NGQ2 149 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 UNC119BA6NIH7 251 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 DVL1O14640 695 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 LIPFP07098 398 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 H1F0P07305 194 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 CRABP1P29762 137 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 MDH1P40925 334 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 CCR9P51686 369 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 ELF3P78545 371 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 PRB3Q04118 309 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 LIPEQ05469 1076 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 IKZF1Q13422 519 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 SEC23BQ15437 767 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 KCNJ8Q15842 424 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 SNAI3Q3KNW1 292 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 ATPAF1Q5TC12 328 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 HIST2H2BDQ6DRA6 164 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 DHRS7BQ6IAN0 325 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 DPY19L2P2Q6ZN68 376 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 GDPGP1Q6ZNW5 385 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 BTN2A1Q7KYR7 527 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 VMO1Q7Z5L0 202 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 CYP4Z1Q86W10 505 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms