RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	RPL15	P61313	204 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	GRB2	P62993	217 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	TAF9	Q16594	264 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	WDR82	Q6UXN9	313 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	GDPGP1	Q6ZNW5	385 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	RASSF6	Q6ZTQ3	369 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	C1QL4	Q86Z23	238 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	ERI1	Q8IV48	349 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	AQP11	Q8NBQ7	271 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR5T2	Q8NGG2	359 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR6N2	Q8NGY6	317 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	H1FX	Q92522	213 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	SPSB4	Q96A44	273 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	OTULIN	Q96BN8	352 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	SGK3	Q96BR1	496 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	PAPOLG	Q9BWT3	736 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	DPAGT1	Q9H3H5	408 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	MED20	Q9H944	212 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	RNPEPL1	Q9HAU8	725 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	SNTG1	Q9NSN8	517 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	IL20	Q9NYY1	176 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	CD300A	Q9UGN4	299 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	hCG_38984	A0A1B0GV85	526 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	CDIPT	O14735	213 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	NDUFB3	O43676	98 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	KRT36	O76013	467 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	CLPX	O76031	633 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	FBP1	P09467	338 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	MUC1	P15941	1255 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	ATP6V1B2	P21281	511 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	GNAL	P38405	381 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZNF121	P58317	390 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	MXRA7	P84157	204 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	OCLN	Q16625	522 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	SLC36A1	Q7Z2H8	476 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	PNKD	Q8N490	385 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	LRTOMT	Q8WZ04	291 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	PGAM5	Q96HS1	289 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZNRD1	Q9P1U0	126 aa		12.45	□□□□□ -0.42
SREBF1-222	ENST00000583732	BTBD17	A6NE02	478 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	SLC22A31	A6NKX4	558 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	FAM183A	A6NL82	134 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	IFNG	P01579	166 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	NAA10	P41227	235 aa	Predicted RBP	12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	SLC15A1	P46059	708 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	GSK3A	P49840	483 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	SLC25A1	P53007	311 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	KLHL12	Q53G59	568 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	TEX30	Q5JUR7	227 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	DEFB107A	Q8IZN7	70 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	CMTM4	Q8IZR5	234 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	LINC00471	Q8N535	108 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	LY6G5B	Q8NDX9	201 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	OR2T33	Q8NG76	320 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	INTS14	Q96SY0	518 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	AMELY	Q99218	206 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	MICU1	Q9BPX6	476 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	ABHD6	Q9BV23	337 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	NMNAT2	Q9BZQ4	307 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	TOR3A	Q9H497	397 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	MED4	Q9NPJ6	270 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	ARL8B	Q9NVJ2	186 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	VNN3	Q9NY84	501 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZNF319	Q9P2F9	582 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	PRPF19	Q9UMS4	504 aa	Known RBP	12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	RHBDD3	Q9Y3P4	386 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732		U3KQV3	271 aa		12.44	□□□□□ -0.42
SREBF1-222	ENST00000583732	NKX6-3	A6NJ46	265 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	RIIAD1	A6NNX1	92 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	RNASEK-C17orf49	H0YIS7	233 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	NPFF	O15130	113 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	SNX3	O60493	162 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	TIPRL	O75663	272 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZNF3	P17036	446 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	AMY2B	P19961	511 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	EEF1B2	P24534	225 aa	Known RBP	12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	HMGA2	P52926	109 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	LRRC10	Q5BKY1	277 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	LINC01590	Q5TEZ4	76 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	STUM	Q69YW2	141 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	C16orf89	Q6UX73	402 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	KCTD8	Q6ZWB6	473 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	IQCF1	Q8N6M8	205 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732		Q8N7P7	452 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	RPL3L	Q92901	407 aa	Known RBP	12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	DCTN5	Q9BTE1	182 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	WDR13	Q9H1Z4	485 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	OR10A2	Q9H208	303 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	TAS2R1	Q9NYW7	299 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	TAGLN3	Q9UI15	199 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	ZNF391	Q9UJN7	358 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	VPREB3	Q9UKI3	123 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	BAIAP2	Q9UQB8	552 aa		12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	CAB39	Q9Y376	341 aa	Predicted RBP	12.43	□□□□□ -0.42
SREBF1-222	ENST00000583732	TET2	Q6N021	2002 aa	Predicted RBP	12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms