RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MEPCE	Q7L2J0	689 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	GID4	Q8IVV7	300 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF679	Q8IYX0	411 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	BBS1	Q8NFJ9	593 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TMEM163	Q8TC26	289 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	DVL3	Q92997	716 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	UPRT	Q96BW1	309 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	CENPN	Q96H22	339 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	DMRTB1	Q96MA1	342 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	CNN2	Q99439	309 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	MICU1	Q9BPX6	476 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TLNRD1	Q9H1K6	362 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZMAT3	Q9HA38	289 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	C1orf123	Q9NWV4	160 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	DNAJC27	Q9NZQ0	273 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF319	Q9P2F9	582 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	KAAG1	Q9UBP8	84 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	LRP12	Q9Y561	859 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ARHGAP32	A7KAX9	2087 aa		10.51	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TENM1	Q9UKZ4	2725 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	IGHV3-64D	A0A0J9YX35	117 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	CCDC182	A6NF36	153 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708		A6NLC8	198 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	GPR37	O15354	613 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ENSA	O43768	121 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	PRKY	O43930	277 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF205	O95201	554 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	VENTX	O95231	258 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ECD	O95905	644 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	GRP	P07492	148 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ANOS1	P23352	680 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	CD80	P33681	288 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	POU4F2	Q12837	409 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TMED1	Q13445	227 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	FAM76B	Q5HYJ3	339 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZBTB37	Q5TC79	503 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	AADACL4	Q5VUY2	407 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	RBMS3	Q6XE24	437 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF841	Q6ZN19	808 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	C9orf139	Q6ZV77	190 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ASRGL1	Q7L266	308 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	GCSAM	Q8N6F7	178 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR1M1	Q8NGA1	313 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	C12orf43	Q96C57	262 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR8B4	Q96RC9	309 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	RTL8A	Q9BWD3	113 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	PAPOLG	Q9BWT3	736 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	MOB1A	Q9H8S9	216 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	BRD7	Q9NPI1	651 aa		10.5	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TMEM269	A0A1B0GVZ9	245 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	MAP2K3	P46734	347 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	RIDA	P52758	137 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	HNRNPA0	Q13151	305 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	MICB	Q29980	383 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	FAM201A	Q5SY85	155 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	DOK3	Q7L591	496 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR8B12	Q8NGG6	310 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR10Z1	Q8NGY1	313 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR5P3	Q8WZ94	311 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ITPKC	Q96DU7	683 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	HIST1H2AA	Q96QV6	131 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	GABARAPL3	Q9BY60	117 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	DNTTIP1	Q9H147	329 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	CLN6	Q9NWW5	311 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	FAM206A	Q9NX38	181 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	WARS2	Q9UGM6	360 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	KLHDC2	Q9Y2U9	406 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	RHBDD3	Q9Y3P4	386 aa		10.49	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	hCG_1807616	A0A1W2PRN6	198 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	MTRF1	O75570	445 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	IGLV3-1	P01715	115 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	MTNR1A	P48039	350 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	COMP	P49747	757 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	EGR3	Q06889	387 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	GFOD2	Q3B7J2	385 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	KLF17	Q5JT82	389 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZFP1	Q6P2D0	407 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	LYPD2	Q6UXB3	125 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	WDR82	Q6UXN9	313 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	AMIGO2	Q86SJ2	522 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	C11orf53	Q8IXP5	236 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TCEANC	Q8N8B7	351 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	PNLDC1	Q8NA58	520 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR8J1	Q8NGP2	316 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	FAM81A	Q8TBF8	368 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	TRUB1	Q8WWH5	349 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	LRTOMT	Q8WZ04	291 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	RFK	Q969G6	155 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	CIB1	Q99828	191 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	SLC6A7	Q99884	636 aa		10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	RBM4B	Q9BQ04	359 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	NUFIP1	Q9UHK0	495 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	OR5B21	A6NL26	309 aa		10.47	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	DHRS7C	A6NNS2	312 aa		10.47	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	SRRM5	B3KS81	715 aa		10.47	□□□□□ -0.73
CDK5RAP3-222	ENST00000581708	ZNF670-ZNF695	F2Z2N8	137 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms