RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZMAT5Q9UDW3 170 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 CBY1Q9Y3M2 126 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 IGHV3-49A0A0A0MS15 119 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 ARPC4-TTLL3A0A0A6YYG9 625 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 HACD1B0YJ81 288 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 H3BN98 237 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 CTNSO60931 367 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 SRMP19623 302 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 CLDN6P56747 220 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 IFITM3Q01628 133 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 DMC1Q14565 340 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 SHHQ15465 462 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 HADHQ16836 314 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 TPRG1LQ5T0D9 272 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 GUSBP11Q6P575 273 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 TMPRSS11AQ6ZMR5 421 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 OR5T3Q8NGG3 340 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF721Q8TF20 911 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 DCAKDQ8WVC6 231 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 RTN4IP1Q8WWV3 396 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 CDS1Q92903 461 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 KCNS1Q96KK3 526 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 TEAD3Q99594 435 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 SCRT1Q9BWW7 348 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 FARSAQ9Y285 508 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF257Q9Y2Q1 563 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 S4R3C0 116 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 RB1CC1Q8TDY2 1594 aa2.6□□□□□ -1.99
SMCHD1-205ENST00000581383 GPR179Q6PRD1 2367 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 NEURL4Q96JN8 1562 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 LOC100653049A0A140TA62 436 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 M0R1X1 148 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 MANBAO00462 879 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 PLIN3O60664 434 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 KRT34O76011 436 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 PTTG1O95997 202 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 CYB5R3P00387 301 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 GFAPP14136 432 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF14P17017 642 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 MSR1P21757 451 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 APLNRP35414 380 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 PCK1P35558 622 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 PRLHRP49683 370 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 NAB1Q13506 487 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 OR1Q1Q15612 314 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 ULK3Q6PHR2 472 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 UNQ9165/PRO28630Q6UXU0 137 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 Q6ZSR6 202 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 LINC00336Q6ZUF6 198 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 SLC30A8Q8IWU4 369 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 DRAM1Q8N682 238 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 LRRC52Q8N7C0 313 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 WDR31Q8NA23 367 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 GATSQ8NAP1 163 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 NUDT9Q9BW91 350 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF717Q9BY31 904 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 IL22Q9GZX6 179 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 SIGLEC9Q9Y336 463 aa2.59□□□□□ -1.99
SMCHD1-205ENST00000581383 COL27A1Q8IZC6 1860 aaPredicted RBP2.58□□□□□ -2
SMCHD1-205ENST00000581383 A0A0A6YYD5 115 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 A0A1B0GUH1 482 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 A8MUU9 505 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 BTNL10A8MVZ5 291 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 TRDMT1O14717 391 aaKnown RBP2.58□□□□□ -2
SMCHD1-205ENST00000581383 POLR1CO15160 346 aaPredicted RBP2.58□□□□□ -2
SMCHD1-205ENST00000581383 CDRT1O95170 752 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 PTHP01270 115 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 TRBV12-3P01733 135 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 HSPD1P10809 573 aaKnown RBP2.58□□□□□ -2
SMCHD1-205ENST00000581383 THRAP10827 490 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 CFHR2P36980 270 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 UBE2E1P51965 193 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 PAFAH1B2P68402 229 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 VTCN1Q7Z7D3 282 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 ZNF321PQ8N8H1 164 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 TMEM105Q8N8V8 129 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 TCP10LQ8TDR4 215 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 RXFP2Q8WXD0 754 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 CPNE4Q96A23 557 aaPredicted RBP2.58□□□□□ -2
SMCHD1-205ENST00000581383 UBE2E2Q96LR5 201 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 BCL7BQ9BQE9 202 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 ULBP2Q9BZM5 246 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 TREX1Q9NSU2 369 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 MARCOQ9UEW3 520 aaPredicted RBP2.58□□□□□ -2
SMCHD1-205ENST00000581383 CES1P1Q9UKY3 287 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 C2orf16Q68DN1 1984 aa2.58□□□□□ -2
SMCHD1-205ENST00000581383 A0A0B4J2E0 115 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 GOLGA8JA6NMD2 632 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 H0YC42 278 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 GATBO75879 557 aaKnown RBP2.57□□□□□ -2
SMCHD1-205ENST00000581383 RPN2P04844 631 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 KLK1P06870 262 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 DCNP07585 359 aaKnown RBP2.57□□□□□ -2
SMCHD1-205ENST00000581383 GOLGA8HP0CJ92 632 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 GZMAP12544 262 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 CMC4P56277 68 aaPredicted RBP2.57□□□□□ -2
SMCHD1-205ENST00000581383 KDSRQ06136 332 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 C6orf99Q4VX62 202 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 DNLZQ5SXM8 178 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms