RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
COPS3-214ENST00000577246 SPSB4Q96A44 273 aa10.88□□□□□ -0.67
COPS3-214ENST00000577246 ITPKCQ96DU7 683 aa10.88□□□□□ -0.67
COPS3-214ENST00000577246 NKX3-1Q99801 234 aaPredicted RBP10.88□□□□□ -0.67
COPS3-214ENST00000577246 IFT27Q9BW83 186 aa10.88□□□□□ -0.67
COPS3-214ENST00000577246 HAO2Q9NYQ3 351 aa10.88□□□□□ -0.67
COPS3-214ENST00000577246 PLXNB1O43157 2135 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 A0A1W2PPH5 198 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 ANXA2P2A6NMY6 339 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.87□□□□□ -0.67
COPS3-214ENST00000577246 ANGPTL7O43827 346 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 SERPINA1P01009 418 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 NDUFB7P17568 137 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 RHCEP18577 417 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 DLX1P56177 255 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 CSNK2BP67870 215 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 KRT72Q14CN4 511 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 TIGD6Q17RP2 521 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 CRIP3Q6Q6R5 217 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 ZDHHC21Q8IVQ6 265 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 PROKR2Q8NFJ6 384 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 DUS3LQ96G46 650 aaKnown RBP10.87□□□□□ -0.67
COPS3-214ENST00000577246 ATP6V1G3Q96LB4 118 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 KCNJ15Q99712 375 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 MICU1Q9BPX6 476 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 OCSTAMPQ9BR26 566 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 CDCA4Q9BXL8 241 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 TLNRD1Q9H1K6 362 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 OR52D1Q9H346 318 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 ABCB9Q9NP78 766 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 MRPL22Q9NWU5 206 aaKnown RBP10.87□□□□□ -0.67
COPS3-214ENST00000577246 ZNF391Q9UJN7 358 aa10.87□□□□□ -0.67
COPS3-214ENST00000577246 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 CDIPTO14735 213 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 SIGLEC5O15389 551 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
COPS3-214ENST00000577246 ALDOBP05062 364 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 VSIG8P0DPA2 414 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 CD28P10747 220 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 SLC15A1P46059 708 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 PRKXP51817 358 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 LGALS4P56470 323 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 SMIM11AP58511 58 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
COPS3-214ENST00000577246 SPIBQ01892 262 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 LIPEQ05469 1076 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 KLF10Q13118 480 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 ZNF788Q6ZQV5 615 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 DCXRQ7Z4W1 244 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 WDR86Q86TI4 376 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
COPS3-214ENST00000577246 CSNK2A3Q8NEV1 391 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 OR5T2Q8NGG2 359 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 RORBQ92753 470 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 FAM162AQ96A26 154 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 WWC2-AS2Q96NR7 200 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 RAB3IPQ96QF0 476 aaPredicted RBP10.86□□□□□ -0.67
COPS3-214ENST00000577246 RTL8AQ9BWD3 113 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 PAPOLGQ9BWT3 736 aaKnown RBP10.86□□□□□ -0.67
COPS3-214ENST00000577246 HEXA-AS1Q9H8Q6 139 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 ADA2Q9NZK5 511 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 N6AMT1Q9Y5N5 214 aa10.86□□□□□ -0.67
COPS3-214ENST00000577246 TRBV4-1A0A0J9YWV2 114 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 hCG_1809904A0A1W2PP81 198 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 A0A1W2PPE2 198 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 A0A1W2PR64 198 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 A0A1W2PRV1 198 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 TMEM210A6NLX4 147 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 ZNF878C9JN71 531 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 NDUFAB1O14561 156 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 TBX1O43435 398 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 KRT34O76011 436 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 APOC1P02654 83 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 SLC2A1P11166 492 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 IFNGR2P38484 337 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 GRB2P62993 217 aaKnown RBP10.85□□□□□ -0.67
COPS3-214ENST00000577246 DGUOKQ16854 277 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 ZBTB37Q5TC79 503 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 SLC16A9Q7RTY1 509 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 Q8N2B8 174 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 OR52H1Q8NGJ2 320 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 SEH1LQ96EE3 360 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 REEP6Q96HR9 211 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
COPS3-214ENST00000577246 FN3KQ9H479 309 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 CENPMQ9NSP4 180 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 CMTM6Q9NX76 183 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 NDUFAF4Q9P032 175 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 PITPNC1Q9UKF7 332 aa10.85□□□□□ -0.67
COPS3-214ENST00000577246 CHST1O43916 411 aa10.84□□□□□ -0.67
COPS3-214ENST00000577246 DUS4LO95620 317 aaKnown RBP10.84□□□□□ -0.67
COPS3-214ENST00000577246 ANXA2P07355 339 aaKnown RBP10.84□□□□□ -0.67
COPS3-214ENST00000577246 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms