RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 RAMP1O60894 148 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 RAB38P57729 211 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 SPEM2Q0P670 501 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-209ENST00000576012 WDFY1Q8IWB7 410 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 SLC43A2Q8N370 569 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 C8orf44Q96CB5 159 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 PCNX3Q9H6A9 2034 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 POLE3Q9NRF9 147 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 HLA-GP17693 338 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 KLK2P20151 261 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 OMGP23515 440 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 PPP1CCP36873 323 aaKnown RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 PCP4P48539 62 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 P2RY4P51582 365 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 PRSS12P56730 875 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 ZNF117Q03924 483 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 GLO1Q04760 184 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 BEND4Q6ZU67 534 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 THAP3Q8WTV1 239 aaPredicted RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 LMF2Q9BU23 707 aaKnown RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 SLC26A1Q9H2B4 701 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 RNF122Q9H9V4 155 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 UBQLN4Q9NRR5 601 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 DBX1A6NMT0 343 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 SHISA8B8ZZ34 492 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 FOXS1O43638 330 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 GIMD1P0DJR0 217 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 ANOS1P23352 680 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 RGS19P49795 217 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 ZNF84P51523 738 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 RPL27P61353 136 aaKnown RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 GPR61Q9BZJ8 451 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 THAP10Q9P2Z0 257 aaPredicted RBP12.9□□□□□ -0.34
SCARF1-209ENST00000576012 TIMM10BQ9Y5J6 103 aa12.9□□□□□ -0.34
SCARF1-209ENST00000576012 ZNF708P17019 499 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 IGFBP3P17936 291 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 TEX30Q5JUR7 227 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 SPNS3Q6ZMD2 512 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 OOSP2Q86WS3 158 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 OR13G1Q8NGZ3 307 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 BAHD1Q8TBE0 780 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 SMOC1Q9H4F8 434 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 B3GALT1Q9Y5Z6 326 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 MEGF11A6BM72 1044 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 LDLRAD4O15165 306 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 TMEM127O75204 238 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 NXPH3O95157 252 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 IL33O95760 270 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 NDUFB7P17568 137 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 RBMXP38159 391 aaKnown RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 SULT1A2P50226 295 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 HAGHQ16775 308 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 CARD17Q5XLA6 110 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 ABHD12BQ7Z5M8 362 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 STX12Q86Y82 276 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 RTBDNQ9BSG5 229 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 R4GMQ9 66 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 CDRT15L2A8MXV6 281 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 IGHV2-5P01817 119 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 QDPRP09417 244 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 ZNF20P17024 532 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 SNU13P55769 128 aaKnown RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 FXYD4P59646 89 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 ISXQ2M1V0 245 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
SCARF1-209ENST00000576012 CPEB2Q7Z5Q1 589 aaKnown RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 HDHD3Q9BSH5 251 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 MRPS28Q9Y2Q9 187 aaKnown RBP12.89□□□□□ -0.35
SCARF1-209ENST00000576012 IFITM10A6NMD0 228 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 H3BML4 177 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 CLDN4O14493 209 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 ADAM10O14672 748 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 PHYHO14832 338 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 CD37P11049 281 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 TLE1Q04724 770 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 GAMTQ14353 236 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 C16orf54Q6UWD8 224 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 PLXDC2Q6UX71 529 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 SHISA6Q6ZSJ9 500 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 OR14K1Q8NGZ2 314 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 MR1Q95460 341 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 ABHD14AQ9BUJ0 271 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms