RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PAICSP22234 425 aaKnown RBP13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 VDAC2P45880 294 aaPredicted RBP13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 BLCAPP62952 87 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 MKXQ8IYA7 352 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 FAM185AQ8N0U4 392 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 OR6V1Q8N148 313 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 MREGQ8N565 214 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 SLC26A10Q8NG04 563 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 GAFA1Q96PS6 74 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 WDR13Q9H1Z4 485 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 FFAR1O14842 300 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 PTP4A3O75365 173 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 GLCEO94923 617 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 HLA-DQA2P01906 255 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 CHRM2P08172 466 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 COX7A1P24310 79 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 SLC36A3Q495N2 470 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 DMRTC1Q5HYR2 192 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 NANOGP8Q6NSW7 305 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 ZNF788Q6ZQV5 615 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 OFCC1Q8IZS5 231 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 FAM46AQ96IP4 442 aaKnown RBP13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 TCF19Q9Y242 345 aa13.12□□□□□ -0.31
CTDNEP1-211ENST00000575783 A6NDX4 124 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 SYNGR1O43759 233 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 CLIC3O95833 236 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 LMO1P25800 156 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 RPS6KA3P51812 740 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 CASC10Q5T4H9 136 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 LHFPL4Q7Z7J7 247 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 CENPVQ7Z7K6 275 aaPredicted RBP13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 MAP6Q96JE9 813 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 KRTAP17-1Q9BYP8 105 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 PPP1R3EQ9H7J1 279 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 SIGLEC7Q9Y286 467 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 TSSC4Q9Y5U2 329 aaPredicted RBP13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 STAB2Q8WWQ8 2551 aa13.11□□□□□ -0.31
CTDNEP1-211ENST00000575783 ALDOBP05062 364 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 TROVE2P10155 538 aaKnown RBP eCLIP13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 SLC2A1P11166 492 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 KDELR2P33947 212 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 GABRA2P47869 451 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 CAV3P56539 151 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 SELENOWP63302 87 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 DPY19L2P2Q6ZN68 376 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 C7orf26Q96N11 449 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 RAB3IPQ96QF0 476 aaPredicted RBP13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 NMNAT3Q96T66 252 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 GPR61Q9BZJ8 451 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 DNAH1Q9P2D7 4330 aa13.1□□□□□ -0.31
CTDNEP1-211ENST00000575783 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 F2RL2O00254 374 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 SIGLEC5O15389 551 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 TIPRLO75663 272 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 TXNDC12O95881 172 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 IFNW1P05000 195 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 ACAA1P09110 424 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 DDOSTP39656 456 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 PRKXP51817 358 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 CYLC2Q14093 348 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 KHDC1LQ5JSQ8 128 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 DRAM2Q6UX65 266 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 CPLX4Q7Z7G2 160 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 ANGPTL6Q8NI99 470 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 RPS4Y2Q8TD47 263 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 MYDGFQ969H8 173 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 ERMAPQ96PL5 475 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 GPX7Q96SL4 187 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 TMEM5Q9Y2B1 443 aa13.09□□□□□ -0.31
CTDNEP1-211ENST00000575783 AKR7A2O43488 359 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 RENP00797 406 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 GNALP38405 381 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 RPS27P42677 84 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 SLC7A2P52569 658 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 MAGOHP61326 146 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 ERICH5Q6P6B1 374 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 TMEM185AQ8NFB2 350 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 MUC7Q8TAX7 377 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 RPL3LQ92901 407 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 RSRC1Q96IZ7 334 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 ASCL2Q99929 193 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 TMEM120AQ9BXJ8 343 aa13.08□□□□□ -0.32
CTDNEP1-211ENST00000575783 C19orf12Q9NSK7 152 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms