RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 NKX3-1Q99801 234 aaPredicted RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 MICU1Q9BPX6 476 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 GPR61Q9BZJ8 451 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 HAO2Q9NYQ3 351 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 SLC25A10Q9UBX3 287 aaPredicted RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 PITPNC1Q9UKF7 332 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 FAM32AQ9Y421 112 aaKnown RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 TANC2Q9HCD6 1990 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 A0A1B0GW55 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 ANXA2P2A6NMY6 339 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 VGLL3A8MV65 326 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 K7EIL1 84 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 FXYD1O00168 92 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 CDIPTO14735 213 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 MRASO14807 208 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 ANGPTL7O43827 346 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 H1F0P07305 194 aaKnown RBP7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L2P0CJ85 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L3P0CJ86 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L4P0CJ87 422 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L5P0CJ88 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L6P0CJ89 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L7P0CJ90 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 PF4V1P10720 104 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 IGLL1P15814 213 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 NDUFB7P17568 137 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 GNALP38405 381 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 LGALS4P56470 323 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 SLC35A2P78381 396 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 ZBTB37Q5TC79 503 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 C11orf87Q6NUJ2 197 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4L9Q6RFH8 374 aaPredicted RBP7.31□□□□□ -1.24
SMG6-218ENST00000575454 ZNF788Q6ZQV5 615 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 FGFRL1Q8N441 504 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 RORBQ92753 470 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 SPSB4Q96A44 273 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 RCC1LQ96I51 464 aaKnown RBP7.31□□□□□ -1.24
SMG6-218ENST00000575454 AJUBAQ96IF1 538 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 MAP6Q96JE9 813 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 RAB3IPQ96QF0 476 aaPredicted RBP7.31□□□□□ -1.24
SMG6-218ENST00000575454 CITED2Q99967 270 aaPredicted RBP7.31□□□□□ -1.24
SMG6-218ENST00000575454 COPS4Q9BT78 406 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 PRSS22Q9GZN4 317 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 TLNRD1Q9H1K6 362 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 ZNF702PQ9H963 129 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 ABCB9Q9NP78 766 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 RPRD1BQ9NQG5 326 aaKnown RBP7.31□□□□□ -1.24
SMG6-218ENST00000575454 SERTAD4Q9NUC0 356 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 DUX4Q9UBX2 424 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 LRP12Q9Y561 859 aa7.31□□□□□ -1.24
SMG6-218ENST00000575454 A0A0G2JND7 137 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 TMEM210A6NLX4 147 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 F2RL2O00254 374 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 GSTA4O15217 222 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 SIGLEC5O15389 551 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 CLIC3O95833 236 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 APOC1P02654 83 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ACAA1P09110 424 aaPredicted RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 HIST1H1CP16403 213 aaKnown RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 SLC15A1P46059 708 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 OMPP47874 163 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 BMXP51813 675 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 SMIM11AP58511 58 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 KRT72Q14CN4 511 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 CNN3Q15417 329 aaKnown RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 FGD3Q5JSP0 725 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 AGBL2Q5U5Z8 902 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 CBLL1Q75N03 491 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ARPINQ7Z6K5 226 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 CSNK2A3Q8NEV1 391 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 OR52H1Q8NGJ2 320 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 OR4K13Q8NH42 304 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ANGPTL6Q8NI99 470 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 WIPF2Q8TF74 440 aaPredicted RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 C17orf50Q8WW18 174 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 DPF1Q92782 380 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 HSH2DQ96JZ2 352 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 DDOQ99489 341 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 KCNJ15Q99712 375 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 IFT27Q9BW83 186 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 RTL8AQ9BWD3 113 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 KRTAP17-1Q9BYP8 105 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 WNT10AQ9GZT5 417 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ABCB10Q9NRK6 738 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ADA2Q9NZK5 511 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ZMAT5Q9UDW3 170 aaKnown RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 ZNF391Q9UJN7 358 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 ENPP4Q9Y6X5 453 aa7.3□□□□□ -1.24
SMG6-218ENST00000575454 DYNC2H1Q8NCM8 4307 aaKnown RBP7.3□□□□□ -1.24
SMG6-218ENST00000575454 MEGF11A6BM72 1044 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 ADARB2-AS1A8MUL3 147 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 CXCR6O00574 342 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 CHST1O43916 411 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 PF4P02776 101 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 RHCEP18577 417 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 AMY2BP19961 511 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms