RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 CXCR6O00574 342 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 CDIPTO14735 213 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 TBX1O43435 398 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 KRT34O76011 436 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 SERPINA1P01009 418 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 PSKH1P11801 424 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 ZNF823P16415 610 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 NDUFB7P17568 137 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 CD33P20138 364 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 POU1F1P28069 291 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 PYCR1P32322 319 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 KLF10Q13118 480 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 DGUOKQ16854 277 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 LYPD4Q6UWN0 246 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 C12orf43Q96C57 262 aaKnown RBP14.24□□□□□ -0.13
CCDC40-211ENST00000574099 DUS3LQ96G46 650 aaKnown RBP14.24□□□□□ -0.13
CCDC40-211ENST00000574099 AJUBAQ96IF1 538 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 IFT27Q9BW83 186 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 WDR13Q9H1Z4 485 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 OR52D1Q9H346 318 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 ZNF702PQ9H963 129 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 SERTAD4Q9NUC0 356 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 INTS9Q9NV88 658 aaKnown RBP14.24□□□□□ -0.13
CCDC40-211ENST00000574099 GID8Q9NWU2 228 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 CMTM6Q9NX76 183 aa14.24□□□□□ -0.13
CCDC40-211ENST00000574099 SF3B6Q9Y3B4 125 aaKnown RBP14.24□□□□□ -0.13
CCDC40-211ENST00000574099 A0A1W2PRQ8 180 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 TVP23AA6NH52 213 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 H0YAE9 185 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 GSTA4O15217 222 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 NOS3P29474 1203 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 SLC6A6P31641 620 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 OTX1P32242 354 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-211ENST00000574099 NAA10P41227 235 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-211ENST00000574099 SF3A3Q12874 501 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC40-211ENST00000574099 BLMHQ13867 455 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 DGCR6Q14129 220 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 METTL21CQ5VZV1 264 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 OR52J3Q8NH60 311 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 GAFA1Q96PS6 74 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 OR5M11Q96RB7 305 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 OPA3Q9H6K4 179 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 KRCC1Q9NPI7 259 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-211ENST00000574099 HAO2Q9NYQ3 351 aa14.23□□□□□ -0.13
CCDC40-211ENST00000574099 A0A1W2PRX2 142 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 XRCC2O43543 280 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 EDF1O60869 148 aaKnown RBP14.22□□□□□ -0.13
CCDC40-211ENST00000574099 DIRAS1O95057 198 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 GSK3BP49841 420 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 SLC7A2P52569 658 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 LIPEQ05469 1076 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 TAF13Q15543 124 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 PLA1AQ53H76 456 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 DEFB121Q5J5C9 76 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 SLC35F1Q5T1Q4 408 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 SLC16A9Q7RTY1 509 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 DCXRQ7Z4W1 244 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 ZDHHC21Q8IVQ6 265 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 FAM185AQ8N0U4 392 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 MEGF9Q9H1U4 602 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 CENPMQ9NSP4 180 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 KCNG2Q9UJ96 466 aa14.22□□□□□ -0.13
CCDC40-211ENST00000574099 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
CCDC40-211ENST00000574099 ARPC3O15145 178 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 TIPRLO75663 272 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 DDOSTP39656 456 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 FAM3AP98173 230 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 MAPRE2Q15555 327 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 TIGD6Q17RP2 521 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 ATPAF1Q5TC12 328 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-211ENST00000574099 ZNF788Q6ZQV5 615 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 PROKR2Q8NFJ6 384 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 OR4C15Q8NGM1 316 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 RPL3LQ92901 407 aaKnown RBP14.21□□□□□ -0.13
CCDC40-211ENST00000574099 FAM162AQ96A26 154 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 RCN3Q96D15 328 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 ATP6V1G3Q96LB4 118 aa14.21□□□□□ -0.13
CCDC40-211ENST00000574099 RAB3IPQ96QF0 476 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-211ENST00000574099 PAPOLGQ9BWT3 736 aaKnown RBP14.21□□□□□ -0.13
CCDC40-211ENST00000574099 AKR7A2O43488 359 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 PEX14O75381 377 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 ANXA2P07355 339 aaKnown RBP14.2□□□□□ -0.14
CCDC40-211ENST00000574099 SPARCP09486 303 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 NCK1P16333 377 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 GNALP38405 381 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 GABRA2P47869 451 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC40-211ENST00000574099 GFOD2Q3B7J2 385 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 LIAT1Q6ZQX7 453 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 MKXQ8IYA7 352 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 CYB561A3Q8NBI2 242 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 OR51L1Q8NGJ5 315 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 OR5D13Q8NGL4 314 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 PIFOQ8TCI5 191 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 ZNRF4Q8WWF5 429 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 SPSB4Q96A44 273 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 SLAMF6Q96DU3 332 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 REEP6Q96HR9 211 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 WWC2-AS2Q96NR7 200 aa14.2□□□□□ -0.14
CCDC40-211ENST00000574099 KCNJ15Q99712 375 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms