RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 KMT5CQ86Y97 462 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 TMED6Q8WW62 240 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 GPR61Q9BZJ8 451 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 POM121BA6NF01 834 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 GFRA1P56159 465 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 SPEM2Q0P670 501 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 FAHD2BQ6P2I3 314 aaPredicted RBP14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 GPA33Q99795 319 aa14.4□□□□□ -0.1
CACNA1A-202ENST00000573710 TRABD2BA6NFA1 517 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 CSO75390 466 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 NID1P14543 1247 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 GABRB3P28472 473 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 GNG4P50150 75 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 TCL1AP56279 114 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 COL19A1Q14993 1142 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 C6orf201Q7Z4U5 140 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 MYPOPQ86VE0 399 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 CELF2-AS1Q8N7Q2 184 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 ADPRHL1Q8NDY3 354 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 FBXO27Q8NI29 283 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 CDRT15L2A8MXV6 281 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 ADGRE4PQ86SQ3 457 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 TAAR6Q96RI8 345 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 IGSF5Q9NSI5 407 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 CCL26Q9Y258 94 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 LOXL2Q9Y4K0 774 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 CADP27708 2225 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 SPRY1O43609 319 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 SMN1Q16637 294 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 H1FNTQ75WM6 255 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 LYG1Q8N1E2 194 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 MBD3L1Q8WWY6 194 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 MEGF10Q96KG7 1140 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 C16orf70Q9BSU1 422 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 OR2T8A6NH00 312 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 LGALS7P47929 136 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 FGF8P55075 233 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 ZDHHC23Q8IYP9 409 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 D2HGDHQ8N465 521 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 MRPL43Q8N983 215 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 IGHV4-34P06331 123 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 PNLIPRP2P54317 469 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 MFAP4P55083 255 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 CLDN15P56746 228 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 ERVS71-1P61550 626 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 UMODL1-AS1Q8N2C9 162 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 GPR150Q8NGU9 434 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 HSPE1-MOB4S4R3N1 261 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 STAG3L2P0CL84 134 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 C1orf140Q5VVS0 124 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 FAM109BQ6ICB4 259 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 LHFPL2Q6ZUX7 228 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 FAM210BQ96KR6 192 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 ATP5SQ99766 215 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 NAA60Q9H7X0 242 aa14.39□□□□□ -0.11
CACNA1A-202ENST00000573710 NKAIN1Q4KMZ8 207 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 FAM162BQ5T6X4 162 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 ZNF441Q8N8Z8 693 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 MAP1LC3CQ9BXW4 147 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 KLF13Q9Y2Y9 288 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 TRBV23-1A0A0A0MS06 115 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 H0Y8X5 98 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 NRARPQ7Z6K4 114 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 PRSS35Q8N3Z0 413 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 MAFAQ8NHW3 353 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 ARRDC2Q8TBH0 407 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 CHD3Q12873 2000 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 PTBP1P26599 531 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 OR11G2Q8NGC1 345 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 KLK4Q9Y5K2 254 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 TRAT1Q6PIZ9 186 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 SIAH1Q8IUQ4 282 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 ZNF547Q8IVP9 402 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 SLC35B4Q969S0 331 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 DDOQ99489 341 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 ZFC3H1O60293 1989 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 C1SP09871 688 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 B4GALT1P15291 398 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 SPCS3P61009 180 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 SARAFQ96BY9 339 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 GRAMD2BQ96HH9 432 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 VSIG4Q9Y279 399 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 EXOGQ9Y2C4 368 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 CICQ96RK0 1608 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 CHRNA7P36544 502 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 TIAL1Q01085 375 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 OR1C1Q15619 314 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 CLLU1Q5K131 121 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 OR4A47Q6IF82 309 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 DEFB124Q8NES8 71 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 SLC26A10Q8NG04 563 aa14.38□□□□□ -0.11
CACNA1A-202ENST00000573710 FCN1O00602 326 aa14.37□□□□□ -0.11
CACNA1A-202ENST00000573710 FAM189A1O60320 539 aa14.37□□□□□ -0.11
CACNA1A-202ENST00000573710 SNRPCP09234 159 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-202ENST00000573710 OR2T7P0C7T2 308 aa14.37□□□□□ -0.11
CACNA1A-202ENST00000573710 LRRTM3Q86VH5 581 aa14.37□□□□□ -0.11
CACNA1A-202ENST00000573710 EGLN2Q96KS0 407 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms