RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SP140LQ9H930 580 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 TMEM165Q9HC07 324 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 SVEP1Q4LDE5 3571 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 MXRA5Q9NR99 2828 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 CUBNO60494 3623 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PPIAL4EA0A075B759 164 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 LOC105371242A0A075B767 164 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 A0A0A6YYJ9 748 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PPIAL4CA0A0B4J2A2 164 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 C5orf63A6NC05 138 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 ZNF878C9JN71 531 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PPIAL4DF5H284 164 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 TRAPPC2LH3BP13 241 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 XRCC2O43543 280 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 GMDSO60547 372 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 ATP5HO75947 161 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 APOC1P02654 83 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PPIAL4FP0DN26 164 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 SLC2A1P11166 492 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 IRF2P14316 349 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 CPT2P23786 658 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 HSD11B1P28845 292 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PMELP40967 661 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 CD200P41217 278 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 GRB2P62993 217 aaKnown RBP6.23□□□□□ -1.41
NUP88-205ENST00000572809 ODF1Q14990 250 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 OR8G1Q15617 311 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 TMEM236Q5W0B7 351 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PLBD1Q6P4A8 553 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 RHOUQ7L0Q8 258 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.23□□□□□ -1.41
NUP88-205ENST00000572809 CPOQ8IVL8 374 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 TIGD4Q8IY51 512 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 C1orf87Q8N0U7 546 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 SPERTQ8NA61 448 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 OR11L1Q8NGX0 322 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 OR6N2Q8NGY6 317 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 OR2AE1Q8NHA4 323 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 NANPQ8TBE9 248 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 THEM6Q8WUY1 208 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 SGK3Q96BR1 496 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 FOXRED1Q96CU9 486 aaPredicted RBP6.23□□□□□ -1.41
NUP88-205ENST00000572809 NRBF2Q96F24 287 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 PLEKHA8Q96JA3 519 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 INTS14Q96SY0 518 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 ABHD6Q9BV23 337 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 TEX12Q9BXU0 123 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 MMADHCQ9H3L0 296 aaPredicted RBP6.23□□□□□ -1.41
NUP88-205ENST00000572809 TOR3AQ9H497 397 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 OPA3Q9H6K4 179 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 MARCH7Q9H992 704 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 NTN4Q9HB63 628 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 MMP26Q9NRE1 261 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 UFSP2Q9NUQ7 469 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 MIOXQ9UGB7 285 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 NOP16Q9Y3C1 178 aaKnown RBP6.23□□□□□ -1.41
NUP88-205ENST00000572809 PPIAL4AQ9Y536 164 aa6.23□□□□□ -1.41
NUP88-205ENST00000572809 TANC2Q9HCD6 1990 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 CEACAM18A8MTB9 384 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 NPIPB6E9PJ23 425 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 F5H0A9 414 aaPredicted RBP6.22□□□□□ -1.41
NUP88-205ENST00000572809 TIPRLO75663 272 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 VENTXO95231 258 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 FSTL3O95633 263 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ANXA2P07355 339 aaKnown RBP6.22□□□□□ -1.41
NUP88-205ENST00000572809 LYNP07948 512 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 H2BFMP0C1H6 154 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ADRA2CP18825 462 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ANOS1P23352 680 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 DDOSTP39656 456 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 CX3CR1P49238 355 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 DAPP51397 102 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 CRISP1P54107 249 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 SEC61A1P61619 476 aaKnown RBP6.22□□□□□ -1.41
NUP88-205ENST00000572809 MPPED2Q15777 294 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 SNAPC1Q16533 368 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 KLHL12Q53G59 568 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ESCO2Q56NI9 601 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 TOR2AQ5JU69 321 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 SLC35D3Q5M8T2 416 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 FAM201AQ5SY85 155 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 PRAMEF6Q5VXH4 476 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 CD276Q5ZPR3 534 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 TEPPQ6URK8 271 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 FAM57BQ71RH2 274 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 C1QL2Q7Z5L3 287 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 KLBQ86Z14 1044 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 OR5K1Q8NHB7 308 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 OTOSQ8NHW6 89 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ZNF418Q8TF45 676 aaPredicted RBP6.22□□□□□ -1.41
NUP88-205ENST00000572809 RNF133Q8WVZ7 376 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 DNAJC9Q8WXX5 260 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 SPSB4Q96A44 273 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ZMYND19Q96E35 227 aaPredicted RBP6.22□□□□□ -1.41
NUP88-205ENST00000572809 AMELYQ99218 206 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 TMEM246Q9BRR3 403 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 C19orf24Q9BVV8 132 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 FN3KRPQ9HA64 309 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 TVP23BQ9NYZ1 205 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 MRPL15Q9P015 296 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms