RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 GPR6P46095 362 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 ETV1P50549 477 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 GTF2A1P52655 376 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 LMO4P61968 165 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 CSNK2BP67870 215 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 MRPS11P82912 194 aaKnown RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 RIPK1Q13546 671 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 OR8G1Q15617 311 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 ZNF829Q3KNS6 432 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 OR2G6Q5TZ20 316 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 Q6ZSR3 168 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 ACBD7Q8N6N7 88 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 PLPP7Q8NBV4 271 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 OR52H1Q8NGJ2 320 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 OR14K1Q8NGZ2 314 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 ITPKCQ96DU7 683 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 PELI1Q96FA3 418 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 C4orf36Q96KX1 117 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 ADAT1Q9BUB4 502 aaKnown RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 ALG8Q9BVK2 526 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 METTL17Q9H7H0 456 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 FGF20Q9NP95 211 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 TMEM106BQ9NUM4 274 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 UFSP2Q9NUQ7 469 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 PAK1IP1Q9NWT1 392 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 MRPL15Q9P015 296 aaKnown RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 RRP15Q9Y3B9 282 aaKnown RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 SIRT4Q9Y6E7 314 aaPredicted RBP5.88□□□□□ -1.47
SMG6-209ENST00000571442 V9GYS6 101 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 CUBNO60494 3623 aa5.88□□□□□ -1.47
SMG6-209ENST00000571442 ACOD1A6NK06 481 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 H0YHG0 523 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 TMEM178BH3BS89 294 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 FCN3O75636 299 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 SULT1C4O75897 302 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 CST4P01036 141 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 IGHV2-70P01814 119 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 HEXAP06865 529 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 ZNF16P17020 682 aaPredicted RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 C21orf33P30042 268 aaPredicted RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 GATA4P43694 442 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 TMEM33P57088 247 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 SEC61A1P61619 476 aaKnown RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 RAB40BQ12829 278 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 ZNF154Q13106 437 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 PRDX4Q13162 271 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 IL18R1Q13478 541 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 GALEQ14376 348 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 ZMYND11Q15326 602 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 HFEQ30201 348 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 ZMAT1Q5H9K5 638 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 CEP78Q5JTW2 689 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 BCL2L15Q5TBC7 163 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 IZUMO2Q6UXV1 221 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 KRT74Q7RTS7 529 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 RNF144BQ7Z419 303 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 THAP5Q7Z6K1 395 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 C8orf59Q8N0T1 100 aaPredicted RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 ZNF485Q8NCK3 441 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 OR51A4Q8NGJ6 313 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 OR2G2Q8NGZ5 317 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 PIGCQ92535 297 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 RGP1Q92546 391 aaPredicted RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 MSI2Q96DH6 328 aaKnown RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 SEH1LQ96EE3 360 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 Q96MT0 163 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 PAPOLGQ9BWT3 736 aaKnown RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 JAM3Q9BX67 310 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 EGLN1Q9GZT9 426 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 RGCCQ9H4X1 137 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 OPA3Q9H6K4 179 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 FKBP14Q9NWM8 211 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 PPP1R3CQ9UQK1 317 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 RPL36Q9Y3U8 105 aaKnown RBP5.87□□□□□ -1.47
SMG6-209ENST00000571442 SNX5Q9Y5X3 404 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 NPTNQ9Y639 398 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.87□□□□□ -1.477e-7■□□□□ 8.9
SMG6-209ENST00000571442 ATRQ13535 2644 aa5.87□□□□□ -1.47
SMG6-209ENST00000571442 A0A1B0GW55 424 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 LOC107986453A0A1B0GWG9 222 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 OR4C45A6NMZ5 311 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 ANKRD30BLA7E2S9 258 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 CLDN25C9JDP6 229 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 INAFM1C9JVW0 142 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 H0YJX3 145 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.86□□□□□ -1.47
SMG6-209ENST00000571442 CD5LO43866 347 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DHRS3O75911 302 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 TFF1P04155 84 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 GRPP07492 148 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DUX4L2P0CJ85 424 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DUX4L3P0CJ86 424 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DUX4L4P0CJ87 422 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DUX4L5P0CJ88 424 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DUX4L6P0CJ89 424 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 DUX4L7P0CJ90 424 aa5.86□□□□□ -1.47
SMG6-209ENST00000571442 TNFRSF1AP19438 455 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms