RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 RANBP3Q9H6Z4 567 aaPredicted RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 EVA1AQ9H8M9 152 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 MSL2Q9HCI7 577 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 CYSLTR2Q9NS75 346 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 PLCXD1Q9NUJ7 323 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 BLOC1S6Q9UL45 172 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 RASD1Q9Y272 281 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 POFUT2Q9Y2G5 429 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 CAB39Q9Y376 341 aaPredicted RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 FAM32AQ9Y421 112 aaKnown RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 CEPT1Q9Y6K0 416 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 U3KQV3 271 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 DNAH17Q9UFH2 4485 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 LOC102723971A0A1B0GUV8 181 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 TMEM178BH3BS89 294 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 FAAHO00519 579 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 GADD45GO95257 159 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 AK1P00568 194 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 GRPP07492 148 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 TNFRSF1BP20333 461 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 RPS4Y1P22090 263 aaKnown RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 TACR3P29371 465 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 PRKAR1BP31321 381 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 GGT2P36268 569 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 POLR2IP36954 125 aaKnown RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 OR1E2P47887 323 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 VEGFCP49767 419 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 UCP3P55916 312 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 ESRRGP62508 458 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 SPIBQ01892 262 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 DGCR6Q14129 220 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 ZNF141Q15928 474 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 CNPY1Q3B7I2 92 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 SPATA46Q5T0L3 261 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 THEM4Q5T1C6 240 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 ATAD3BQ5T9A4 648 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 CARD17Q5XLA6 110 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 TEPPQ6URK8 271 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 NHLRC1Q6VVB1 395 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 OLIG3Q7RTU3 272 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 SCAIQ8N9R8 606 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 SMYD1Q8NB12 490 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 OR4D11Q8NGI4 311 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 OR5D16Q8NGK9 328 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 C8orf46Q8TAG6 207 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 ZNF420Q8TAQ5 688 aaPredicted RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 WIPF2Q8TF74 440 aaPredicted RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 SAMD8Q96LT4 415 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 OR5M11Q96RB7 305 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 FEVQ99581 238 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 APOL4Q9BPW4 351 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 TMEM246Q9BRR3 403 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 TAPBPLQ9BX59 468 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 DGCR6LQ9BY27 220 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 POLR2J2Q9GZM3 115 aaKnown RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 C11orf54Q9H0W9 315 aaPredicted RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 SIRPDQ9H106 197 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 POLR2J3Q9H1A7 115 aaKnown RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 ANKRD19PQ9H560 264 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 MTHFD2LQ9H903 347 aaPredicted RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 NMNAT1Q9HAN9 279 aaPredicted RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 POLE3Q9NRF9 147 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 PAPOLBQ9NRJ5 636 aaKnown RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 SERTAD4Q9NUC0 356 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 RLIMQ9NVW2 624 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 ZMAT5Q9UDW3 170 aaKnown RBP5.61□□□□□ -1.51
CHD3-213ENST00000571249 A4GNTQ9UNA3 340 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 PPP1R3CQ9UQK1 317 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 SH3GLB1Q9Y371 365 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 GMPPBQ9Y5P6 360 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 COMMD3-BMI1R4GMX3 469 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 U3KQE9 123 aa5.61□□□□□ -1.51
CHD3-213ENST00000571249 PKD1P98161 4303 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 PTGES3LE9PB15 166 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 H3BUX3 64 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 SLC1A7O00341 560 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 PHYHO14832 338 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 FCMRO60667 390 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 DEDDO75618 318 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 UGT2B17O75795 530 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 CCNB2O95067 398 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 LIPFP07098 398 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 H1F0P07305 194 aaKnown RBP5.6□□□□□ -1.51
CHD3-213ENST00000571249 HTR1AP08908 422 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 ZNF43P17038 809 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 GABRB1P18505 474 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 TNFRSF1AP19438 455 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 EPHA2P29317 976 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 LIPAP38571 399 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 CDH12P55289 794 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 ARF6P62330 175 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 CD83Q01151 205 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 MFSD13AQ14CX5 517 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 TBCEQ15813 527 aaPredicted RBP5.6□□□□□ -1.51
CHD3-213ENST00000571249 ZNF718Q3SXZ3 478 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 FAM69AQ5T7M9 428 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 XAF1Q6GPH4 301 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 LYPD2Q6UXB3 125 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 ZNF841Q6ZN19 808 aa5.6□□□□□ -1.51
CHD3-213ENST00000571249 PXKQ7Z7A4 578 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms