RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SPI1P17947 270 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 AMY2BP19961 511 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 HSD11B1P28845 292 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 PRDX6P30041 224 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 GRK5P34947 590 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 PROK1P58294 105 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF121P58317 390 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 MZT1Q08AG7 82 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 TAF9Q16594 264 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 SAMD4BQ5PRF9 694 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 TEX36Q5VZQ5 186 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 RPL13AP3Q6NVV1 102 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 Q6ZSV7 163 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 RASSF6Q6ZTQ3 369 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ERI1Q8IV48 349 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 PGAM4Q8N0Y7 254 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 IQCF1Q8N6M8 205 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 AQP11Q8NBQ7 271 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 OR6N2Q8NGY6 317 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 H1FXQ92522 213 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 RPL3LQ92901 407 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 AMELYQ99218 206 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 WDR13Q9H1Z4 485 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 MMP27Q9H306 513 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ARL8BQ9NVJ2 186 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 VNN3Q9NY84 501 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 IL20Q9NYY1 176 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF319Q9P2F9 582 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 LYVE1Q9Y5Y7 322 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 U3KQV3 271 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF816-ZNF321PA0A0X1KG74 233 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 hCG_38984A0A1B0GV85 526 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 A0A1B0GVI7 797 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 RNASEK-C17orf49H0YIS7 233 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 NDUFB3O43676 98 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 KRT36O76013 467 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 CCNB2O95067 398 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 ATP6V1B2P21281 511 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 PAX6P26367 422 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 GNALP38405 381 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 DDOSTP39656 456 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 SLC15A1P46059 708 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 GSK3AP49840 483 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 MXRA7P84157 204 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 EGR3Q06889 387 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 KLHL12Q53G59 568 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 DMRTC1Q5HYR2 192 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 LINC01590Q5TEZ4 76 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 DHRS7BQ6IAN0 325 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF770Q6IQ21 691 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 KCTD8Q6ZWB6 473 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 SLC36A1Q7Z2H8 476 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 DEFB107AQ8IZN7 70 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 SPSB4Q96A44 273 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 PGAM5Q96HS1 289 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 ABHD6Q9BV23 337 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 NMNAT2Q9BZQ4 307 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 DPAGT1Q9H3H5 408 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 RNPEPL1Q9HAU8 725 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 ELL3Q9HB65 397 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 KAAG1Q9UBP8 84 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF391Q9UJN7 358 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 SIGLEC9Q9Y336 463 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 KPTNQ9Y664 436 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 CMYA5Q8N3K9 4069 aa7.07□□□□□ -1.28
CTDNEP1-203ENST00000570385 MEIOCA2RUB1 952 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 BTBD17A6NE02 478 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 ANKRD61A6NGH8 418 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 SLC22A31A6NKX4 558 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 RIIAD1A6NNX1 92 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF850A8MQ14 1090 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 NPFFO15130 113 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 AKR7A2O43488 359 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 SNX3O60493 162 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 CLPXO76031 633 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 PAHP00439 452 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 FBP1P09467 338 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 MUC1P15941 1255 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 EEF1B2P24534 225 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 POU1F1P28069 291 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 SAA4P35542 130 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 NAA10P41227 235 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 HMGA2P52926 109 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 SLC25A1P53007 311 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 GRB2P62993 217 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 DGUOKQ16854 277 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 LRRC10Q5BKY1 277 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 TEX30Q5JUR7 227 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 GDPGP1Q6ZNW5 385 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 PRSS45Q7RTY3 260 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 CPLX4Q7Z7G2 160 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 CMTM4Q8IZR5 234 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 Q8N7P7 452 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 C11orf44Q8N8P7 122 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZSCAN4Q8NAM6 433 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 LY6G5BQ8NDX9 201 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 OR2T33Q8NG76 320 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 C17orf50Q8WW18 174 aa7.06□□□□□ -1.28
CTDNEP1-203ENST00000570385 PIGCQ92535 297 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms