RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 FASP25445 335 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 ATP6AP1Q15904 470 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 SHISA2Q6UWI4 295 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 DPY19L4Q7Z388 723 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 OR5K1Q8NHB7 308 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 RNF133Q8WVZ7 376 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 SLC25A28Q96A46 364 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 ABHD6Q9BV23 337 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 SLC22A4Q9H015 551 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 MARCH7Q9H992 704 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 TNFRSF19Q9NS68 423 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 KLHDC2Q9Y2U9 406 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 AP4S1Q9Y587 144 aa11.45□□□□□ -0.58
GTF3C1-211ENST00000569653 A6NLC8 198 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 ZNF879B4DU55 563 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 H3BNX3 289 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 TFF1P04155 84 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 HMGN1P05114 100 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 OPRL1P41146 370 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 MTNR1AP48039 350 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 DLX1P56177 255 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 ZNF121P58317 390 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 EIF2B1Q14232 305 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 GINS1Q14691 196 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 OR8B8Q15620 311 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 FAHD1Q6P587 224 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 Q6YL49 198 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 TIGD4Q8IY51 512 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 PLPP7Q8NBV4 271 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 OTULINQ96BN8 352 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 ZNF696Q9H7X3 374 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 DNAJC27Q9NZQ0 273 aa11.44□□□□□ -0.58
GTF3C1-211ENST00000569653 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 SRRM5B3KS81 715 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 PRR23D1E9PI22 279 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 G3V2T6 193 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 DVL1O14640 695 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 TBX1O43435 398 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 MELTFP08582 738 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 PRR23D2P0DMB1 279 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 SELLP14151 372 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 ACKR3P25106 362 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 PRB3Q04118 309 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 TAF13Q15543 124 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 C16orf87Q6PH81 154 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 WDR82Q6UXN9 313 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 FAM57BQ71RH2 274 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 ZDHHC13Q8IUH4 622 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 ERI1Q8IV48 349 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 OR1M1Q8NGA1 313 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 OR6N2Q8NGY6 317 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 PYDC1Q8WXC3 89 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 TMIGD2Q96BF3 282 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 REEP6Q96HR9 211 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 LYZL4Q96KX0 146 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 WDFY2Q96P53 400 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 INTS14Q96SY0 518 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 PRRG3Q9BZD7 231 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 CHIAQ9BZP6 476 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 SLC25A19Q9HC21 320 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 ERVK-18Q9QC07 812 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 RHBDD3Q9Y3P4 386 aa11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-211ENST00000569653 TRAV38-1A0A0B4J264 116 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 hCG_1807616A0A1W2PRN6 198 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 XRCC2O43543 280 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 SELENOFO60613 162 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 TOX4O94842 621 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 GLCEO94923 617 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 ANXA2P07355 339 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 GSTT1P30711 240 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 GSK3AP49840 483 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 NPY4RP50391 375 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 DAPP51397 102 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 GRB2P62993 217 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 IL13RA1P78552 427 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 CDK5Q00535 292 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 WDR38Q5JTN6 314 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 GPR157Q5UAW9 335 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 BTN2A1Q7KYR7 527 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 BBS1Q8NFJ9 593 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 LRTOMTQ8WZ04 291 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 RAB3IPQ96QF0 476 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 CCL13Q99616 98 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 GABARAPL1Q9H0R8 117 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 TLNRD1Q9H1K6 362 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 BRD7Q9NPI1 651 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 KRT84Q9NSB2 600 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 C1RLQ9NZP8 487 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 KAAG1Q9UBP8 84 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 ENOPH1Q9UHY7 261 aa11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 NOP16Q9Y3C1 178 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-211ENST00000569653 IGHV1-69DA0A0B4J2H0 117 aa11.41□□□□□ -0.58
GTF3C1-211ENST00000569653 A0A0U1RQK1 487 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms